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Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study

A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in lin...

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Autor principal: Mooibroek, Tiddo J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767229/
https://www.ncbi.nlm.nih.gov/pubmed/31527496
http://dx.doi.org/10.3390/molecules24183370
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author Mooibroek, Tiddo J.
author_facet Mooibroek, Tiddo J.
author_sort Mooibroek, Tiddo J.
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description A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in line with the weak interaction energies calculated (≤ –1.5 kcal·mol(−1)) of typical charge neutral adducts such as [Me(3)N-CH(3)···OH(2)] (2a). The interaction energy is enhanced to ≤–5 kcal·mol(−1) when X is more electron withdrawing such as in [O(2)N-CH(3)··O=C(dme)] (20b) and to ≤18 kcal·mol(−1) in cationic species like [Me(3)O(+)-CH(3)···OH(2)](+) (8a).
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spelling pubmed-67672292019-10-02 Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study Mooibroek, Tiddo J. Molecules Article A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in line with the weak interaction energies calculated (≤ –1.5 kcal·mol(−1)) of typical charge neutral adducts such as [Me(3)N-CH(3)···OH(2)] (2a). The interaction energy is enhanced to ≤–5 kcal·mol(−1) when X is more electron withdrawing such as in [O(2)N-CH(3)··O=C(dme)] (20b) and to ≤18 kcal·mol(−1) in cationic species like [Me(3)O(+)-CH(3)···OH(2)](+) (8a). MDPI 2019-09-16 /pmc/articles/PMC6767229/ /pubmed/31527496 http://dx.doi.org/10.3390/molecules24183370 Text en © 2019 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mooibroek, Tiddo J.
Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title_full Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title_fullStr Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title_full_unstemmed Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title_short Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
title_sort intermolecular non-covalent carbon-bonding interactions with methyl groups: a csd, pdb and dft study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767229/
https://www.ncbi.nlm.nih.gov/pubmed/31527496
http://dx.doi.org/10.3390/molecules24183370
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