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Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study
A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in lin...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767229/ https://www.ncbi.nlm.nih.gov/pubmed/31527496 http://dx.doi.org/10.3390/molecules24183370 |
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author | Mooibroek, Tiddo J. |
author_facet | Mooibroek, Tiddo J. |
author_sort | Mooibroek, Tiddo J. |
collection | PubMed |
description | A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in line with the weak interaction energies calculated (≤ –1.5 kcal·mol(−1)) of typical charge neutral adducts such as [Me(3)N-CH(3)···OH(2)] (2a). The interaction energy is enhanced to ≤–5 kcal·mol(−1) when X is more electron withdrawing such as in [O(2)N-CH(3)··O=C(dme)] (20b) and to ≤18 kcal·mol(−1) in cationic species like [Me(3)O(+)-CH(3)···OH(2)](+) (8a). |
format | Online Article Text |
id | pubmed-6767229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67672292019-10-02 Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study Mooibroek, Tiddo J. Molecules Article A systematic evaluation of the CSD and the PDB in conjunction with DFT calculations reveal that non-covalent Carbon-bonding interactions with X–CH(3) can be weakly directional in the solid state (P ≤ 1.5) when X = N or O. This is comparable to very weak CH hydrogen bonding interactions and is in line with the weak interaction energies calculated (≤ –1.5 kcal·mol(−1)) of typical charge neutral adducts such as [Me(3)N-CH(3)···OH(2)] (2a). The interaction energy is enhanced to ≤–5 kcal·mol(−1) when X is more electron withdrawing such as in [O(2)N-CH(3)··O=C(dme)] (20b) and to ≤18 kcal·mol(−1) in cationic species like [Me(3)O(+)-CH(3)···OH(2)](+) (8a). MDPI 2019-09-16 /pmc/articles/PMC6767229/ /pubmed/31527496 http://dx.doi.org/10.3390/molecules24183370 Text en © 2019 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mooibroek, Tiddo J. Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title | Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title_full | Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title_fullStr | Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title_full_unstemmed | Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title_short | Intermolecular Non-Covalent Carbon-Bonding Interactions with Methyl Groups: A CSD, PDB and DFT Study |
title_sort | intermolecular non-covalent carbon-bonding interactions with methyl groups: a csd, pdb and dft study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767229/ https://www.ncbi.nlm.nih.gov/pubmed/31527496 http://dx.doi.org/10.3390/molecules24183370 |
work_keys_str_mv | AT mooibroektiddoj intermolecularnoncovalentcarbonbondinginteractionswithmethylgroupsacsdpdbanddftstudy |