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Identifying and classifying opioid‐related overdoses: A validation study
PURPOSE: The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). METHODS: Primary data were derived from Kaiser Permanente Northw...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767606/ https://www.ncbi.nlm.nih.gov/pubmed/31020755 http://dx.doi.org/10.1002/pds.4772 |
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author | Green, Carla A. Perrin, Nancy A. Hazlehurst, Brian Janoff, Shannon L. DeVeaugh‐Geiss, Angela Carrell, David S. Grijalva, Carlos G. Liang, Caihua Enger, Cheryl L. Coplan, Paul M. |
author_facet | Green, Carla A. Perrin, Nancy A. Hazlehurst, Brian Janoff, Shannon L. DeVeaugh‐Geiss, Angela Carrell, David S. Grijalva, Carlos G. Liang, Caihua Enger, Cheryl L. Coplan, Paul M. |
author_sort | Green, Carla A. |
collection | PubMed |
description | PURPOSE: The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). METHODS: Primary data were derived from Kaiser Permanente Northwest (2008–2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD‐9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD‐10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum. RESULTS: Code‐based algorithm performance was excellent for opioid‐related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin‐involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code‐based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code‐based substance abuse‐involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP‐enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid‐related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross‐site sensitivity for heroin‐involved overdose was greater than 87%, specificity greater than or equal to 99%. CONCLUSIONS: Code‐based algorithms developed to detect opioid‐related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse‐related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP‐enhanced algorithms for suicides/suicide attempts and abuse‐related overdoses perform significantly better than code‐based algorithms and are appropriate for use in settings that have data and capacity to use NLP. |
format | Online Article Text |
id | pubmed-6767606 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67676062019-10-03 Identifying and classifying opioid‐related overdoses: A validation study Green, Carla A. Perrin, Nancy A. Hazlehurst, Brian Janoff, Shannon L. DeVeaugh‐Geiss, Angela Carrell, David S. Grijalva, Carlos G. Liang, Caihua Enger, Cheryl L. Coplan, Paul M. Pharmacoepidemiol Drug Saf Original Reports PURPOSE: The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). METHODS: Primary data were derived from Kaiser Permanente Northwest (2008–2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD‐9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD‐10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum. RESULTS: Code‐based algorithm performance was excellent for opioid‐related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin‐involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code‐based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code‐based substance abuse‐involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP‐enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid‐related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross‐site sensitivity for heroin‐involved overdose was greater than 87%, specificity greater than or equal to 99%. CONCLUSIONS: Code‐based algorithms developed to detect opioid‐related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse‐related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP‐enhanced algorithms for suicides/suicide attempts and abuse‐related overdoses perform significantly better than code‐based algorithms and are appropriate for use in settings that have data and capacity to use NLP. John Wiley and Sons Inc. 2019-04-24 2019-08 /pmc/articles/PMC6767606/ /pubmed/31020755 http://dx.doi.org/10.1002/pds.4772 Text en © 2019 The Authors. Pharmacoepidemiology and Drug Safety Published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Reports Green, Carla A. Perrin, Nancy A. Hazlehurst, Brian Janoff, Shannon L. DeVeaugh‐Geiss, Angela Carrell, David S. Grijalva, Carlos G. Liang, Caihua Enger, Cheryl L. Coplan, Paul M. Identifying and classifying opioid‐related overdoses: A validation study |
title | Identifying and classifying opioid‐related overdoses: A validation study |
title_full | Identifying and classifying opioid‐related overdoses: A validation study |
title_fullStr | Identifying and classifying opioid‐related overdoses: A validation study |
title_full_unstemmed | Identifying and classifying opioid‐related overdoses: A validation study |
title_short | Identifying and classifying opioid‐related overdoses: A validation study |
title_sort | identifying and classifying opioid‐related overdoses: a validation study |
topic | Original Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767606/ https://www.ncbi.nlm.nih.gov/pubmed/31020755 http://dx.doi.org/10.1002/pds.4772 |
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