Cargando…

Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae

BACKGROUND: The quest for novel enzymes for cellulosic biomass-degradation has recently been focussed on lytic polysaccharide monooxygenases (LPMOs/PMOs), Cu-containing proteins that catalyse the oxidative degradation of otherwise recalcitrant polysaccharides using O(2) or H(2)O(2) as a co-substrate...

Descripción completa

Detalles Bibliográficos
Autores principales: Fowler, Claire. A., Sabbadin, Federico, Ciano, Luisa, Hemsworth, Glyn R., Elias, Luisa, Bruce, Neil, McQueen-Mason, Simon, Davies, Gideon J., Walton, Paul H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767633/
https://www.ncbi.nlm.nih.gov/pubmed/31583018
http://dx.doi.org/10.1186/s13068-019-1573-x
_version_ 1783454959696609280
author Fowler, Claire. A.
Sabbadin, Federico
Ciano, Luisa
Hemsworth, Glyn R.
Elias, Luisa
Bruce, Neil
McQueen-Mason, Simon
Davies, Gideon J.
Walton, Paul H.
author_facet Fowler, Claire. A.
Sabbadin, Federico
Ciano, Luisa
Hemsworth, Glyn R.
Elias, Luisa
Bruce, Neil
McQueen-Mason, Simon
Davies, Gideon J.
Walton, Paul H.
author_sort Fowler, Claire. A.
collection PubMed
description BACKGROUND: The quest for novel enzymes for cellulosic biomass-degradation has recently been focussed on lytic polysaccharide monooxygenases (LPMOs/PMOs), Cu-containing proteins that catalyse the oxidative degradation of otherwise recalcitrant polysaccharides using O(2) or H(2)O(2) as a co-substrate. RESULTS: Although classical saprotrophic fungi and bacteria have been a rich source of lytic polysaccharide monooxygenases (LPMOs), we were interested to see if LPMOs from less evident bio-environments could be discovered and assessed for their cellulolytic activity in a biofuel context. In this regard, the marine shipworm Lyrodus pedicellatus represents an interesting source of new enzymes, since it must digest wood particles ingested during its natural tunnel boring behaviour and plays host to a symbiotic bacterium, Teredinibacter turnerae, the genome of which has revealed a multitude of enzymes dedicated to biomass deconstruction. Here, we show that T. turnerae encodes a cellulose-active AA10 LPMO. The 3D structure, at 1.4 Å resolution, along with its EPR spectrum is distinct from other AA10 polysaccharide monooxygenases insofar as it displays a “histidine-brace” catalytic apparatus with changes to the surrounding coordination sphere of the copper. Furthermore, TtAA10A possesses a second, surface accessible, Cu site 14 Å from the classical catalytic centre. Activity measurements show that the LPMO oxidises cellulose and thereby significantly augments the rate of degradation of cellulosic biomass by classical glycoside hydrolases. CONCLUSION: Shipworms are wood-boring marine molluscs that can live on a diet of lignocellulose. Bacterial symbionts of shipworms provide many of the enzymes needed for wood digestion. The shipworm symbiont T. turnerae produces one of the few LPMOs yet described from the marine environment, notably adding to the capability of shipworms to digest recalcitrant polysaccharides.
format Online
Article
Text
id pubmed-6767633
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-67676332019-10-03 Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae Fowler, Claire. A. Sabbadin, Federico Ciano, Luisa Hemsworth, Glyn R. Elias, Luisa Bruce, Neil McQueen-Mason, Simon Davies, Gideon J. Walton, Paul H. Biotechnol Biofuels Research BACKGROUND: The quest for novel enzymes for cellulosic biomass-degradation has recently been focussed on lytic polysaccharide monooxygenases (LPMOs/PMOs), Cu-containing proteins that catalyse the oxidative degradation of otherwise recalcitrant polysaccharides using O(2) or H(2)O(2) as a co-substrate. RESULTS: Although classical saprotrophic fungi and bacteria have been a rich source of lytic polysaccharide monooxygenases (LPMOs), we were interested to see if LPMOs from less evident bio-environments could be discovered and assessed for their cellulolytic activity in a biofuel context. In this regard, the marine shipworm Lyrodus pedicellatus represents an interesting source of new enzymes, since it must digest wood particles ingested during its natural tunnel boring behaviour and plays host to a symbiotic bacterium, Teredinibacter turnerae, the genome of which has revealed a multitude of enzymes dedicated to biomass deconstruction. Here, we show that T. turnerae encodes a cellulose-active AA10 LPMO. The 3D structure, at 1.4 Å resolution, along with its EPR spectrum is distinct from other AA10 polysaccharide monooxygenases insofar as it displays a “histidine-brace” catalytic apparatus with changes to the surrounding coordination sphere of the copper. Furthermore, TtAA10A possesses a second, surface accessible, Cu site 14 Å from the classical catalytic centre. Activity measurements show that the LPMO oxidises cellulose and thereby significantly augments the rate of degradation of cellulosic biomass by classical glycoside hydrolases. CONCLUSION: Shipworms are wood-boring marine molluscs that can live on a diet of lignocellulose. Bacterial symbionts of shipworms provide many of the enzymes needed for wood digestion. The shipworm symbiont T. turnerae produces one of the few LPMOs yet described from the marine environment, notably adding to the capability of shipworms to digest recalcitrant polysaccharides. BioMed Central 2019-09-30 /pmc/articles/PMC6767633/ /pubmed/31583018 http://dx.doi.org/10.1186/s13068-019-1573-x Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Fowler, Claire. A.
Sabbadin, Federico
Ciano, Luisa
Hemsworth, Glyn R.
Elias, Luisa
Bruce, Neil
McQueen-Mason, Simon
Davies, Gideon J.
Walton, Paul H.
Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title_full Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title_fullStr Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title_full_unstemmed Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title_short Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae
title_sort discovery, activity and characterisation of an aa10 lytic polysaccharide oxygenase from the shipworm symbiont teredinibacter turnerae
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767633/
https://www.ncbi.nlm.nih.gov/pubmed/31583018
http://dx.doi.org/10.1186/s13068-019-1573-x
work_keys_str_mv AT fowlerclairea discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT sabbadinfederico discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT cianoluisa discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT hemsworthglynr discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT eliasluisa discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT bruceneil discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT mcqueenmasonsimon discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT daviesgideonj discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae
AT waltonpaulh discoveryactivityandcharacterisationofanaa10lyticpolysaccharideoxygenasefromtheshipwormsymbiontteredinibacterturnerae