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Transcriptomic comparison between beetle strains selected for short and long durations of death feigning
The molecular basis of death feigning, an antipredator behavior that has received much attention recently, was analyzed. We compared the gene expression profiles of strains with different behaviors, i.e., different durations of death feigning, in the beetle Tribolium castaneum. Beetles artificially...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6768993/ https://www.ncbi.nlm.nih.gov/pubmed/31570743 http://dx.doi.org/10.1038/s41598-019-50440-5 |
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author | Uchiyama, Hironobu Sasaki, Ken Hinosawa, Shogo Tanaka, Keisuke Matsumura, Kentarou Yajima, Shunsuke Miyatake, Takahisa |
author_facet | Uchiyama, Hironobu Sasaki, Ken Hinosawa, Shogo Tanaka, Keisuke Matsumura, Kentarou Yajima, Shunsuke Miyatake, Takahisa |
author_sort | Uchiyama, Hironobu |
collection | PubMed |
description | The molecular basis of death feigning, an antipredator behavior that has received much attention recently, was analyzed. We compared the gene expression profiles of strains with different behaviors, i.e., different durations of death feigning, in the beetle Tribolium castaneum. Beetles artificially selected for short (S) and long (L) durations of death feigning for many generations were compared thoroughly by RNA sequencing. We identified 518 differentially expressed genes (DEGs) between the strains. The strains also showed divergence in unexpected gene expression regions. As expected from previous physiological studies, genes associated with the metabolic pathways of tyrosine, a precursor of dopamine, were differentially expressed between the S and L strains; these enzyme-encoding genes were expressed at higher levels in the L strain than in the S strain. We also found that several genes associated with insulin signaling were expressed at higher levels in the S strain than in the L strain. Quantitative real-time PCR analysis showed that the relative expression levels of Tchpd (encoding 4-hydroxyphenylpyruvate dioxygenase, Hpd) and Tcnat (encoding N-acetyltransferase, Nat) were significantly higher in the L strain than in the S strain, suggesting the influence of these enzymes on the supply of dopamine and duration of death feigning. |
format | Online Article Text |
id | pubmed-6768993 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67689932019-10-04 Transcriptomic comparison between beetle strains selected for short and long durations of death feigning Uchiyama, Hironobu Sasaki, Ken Hinosawa, Shogo Tanaka, Keisuke Matsumura, Kentarou Yajima, Shunsuke Miyatake, Takahisa Sci Rep Article The molecular basis of death feigning, an antipredator behavior that has received much attention recently, was analyzed. We compared the gene expression profiles of strains with different behaviors, i.e., different durations of death feigning, in the beetle Tribolium castaneum. Beetles artificially selected for short (S) and long (L) durations of death feigning for many generations were compared thoroughly by RNA sequencing. We identified 518 differentially expressed genes (DEGs) between the strains. The strains also showed divergence in unexpected gene expression regions. As expected from previous physiological studies, genes associated with the metabolic pathways of tyrosine, a precursor of dopamine, were differentially expressed between the S and L strains; these enzyme-encoding genes were expressed at higher levels in the L strain than in the S strain. We also found that several genes associated with insulin signaling were expressed at higher levels in the S strain than in the L strain. Quantitative real-time PCR analysis showed that the relative expression levels of Tchpd (encoding 4-hydroxyphenylpyruvate dioxygenase, Hpd) and Tcnat (encoding N-acetyltransferase, Nat) were significantly higher in the L strain than in the S strain, suggesting the influence of these enzymes on the supply of dopamine and duration of death feigning. Nature Publishing Group UK 2019-09-30 /pmc/articles/PMC6768993/ /pubmed/31570743 http://dx.doi.org/10.1038/s41598-019-50440-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Uchiyama, Hironobu Sasaki, Ken Hinosawa, Shogo Tanaka, Keisuke Matsumura, Kentarou Yajima, Shunsuke Miyatake, Takahisa Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title | Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title_full | Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title_fullStr | Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title_full_unstemmed | Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title_short | Transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
title_sort | transcriptomic comparison between beetle strains selected for short and long durations of death feigning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6768993/ https://www.ncbi.nlm.nih.gov/pubmed/31570743 http://dx.doi.org/10.1038/s41598-019-50440-5 |
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