Cargando…

Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition

The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify no...

Descripción completa

Detalles Bibliográficos
Autores principales: Tedaldi, Gianluca, Pirini, Francesca, Tebaldi, Michela, Zampiga, Valentina, Cangini, Ilaria, Danesi, Rita, Arcangeli, Valentina, Ravegnani, Mila, Abou Khouzam, Raefa, Molinari, Chiara, Oliveira, Carla, Morgagni, Paolo, Saragoni, Luca, Bencivenga, Maria, Ulivi, Paola, Amadori, Dino, Martinelli, Giovanni, Falcini, Fabio, Ranzani, Guglielmina Nadia, Calistri, Daniele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6769562/
https://www.ncbi.nlm.nih.gov/pubmed/31514334
http://dx.doi.org/10.3390/cancers11091340
_version_ 1783455266451226624
author Tedaldi, Gianluca
Pirini, Francesca
Tebaldi, Michela
Zampiga, Valentina
Cangini, Ilaria
Danesi, Rita
Arcangeli, Valentina
Ravegnani, Mila
Abou Khouzam, Raefa
Molinari, Chiara
Oliveira, Carla
Morgagni, Paolo
Saragoni, Luca
Bencivenga, Maria
Ulivi, Paola
Amadori, Dino
Martinelli, Giovanni
Falcini, Fabio
Ranzani, Guglielmina Nadia
Calistri, Daniele
author_facet Tedaldi, Gianluca
Pirini, Francesca
Tebaldi, Michela
Zampiga, Valentina
Cangini, Ilaria
Danesi, Rita
Arcangeli, Valentina
Ravegnani, Mila
Abou Khouzam, Raefa
Molinari, Chiara
Oliveira, Carla
Morgagni, Paolo
Saragoni, Luca
Bencivenga, Maria
Ulivi, Paola
Amadori, Dino
Martinelli, Giovanni
Falcini, Fabio
Ranzani, Guglielmina Nadia
Calistri, Daniele
author_sort Tedaldi, Gianluca
collection PubMed
description The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify novel susceptibility genes, thus improving the management of families at risk, we performed a multigene panel testing on selected patients. We searched for germline pathogenic variants in 94 cancer-related genes in 96 GC or LBC Italian patients with early-onset and/or family history of GC. We found CDH1 pathogenic variants in 10.4% of patients. In 11.5% of cases, we identified loss-of-function variants in BRCA1, BRCA2, PALB2, and ATM breast/ovarian cancer susceptibility genes, as well as in MSH2, PMS2, BMPR1A, PRF1, and BLM genes. In 78.1% of patients, we did not find any variants with clear-cut clinical significance; however, 37.3% of these cases harbored rare missense variants predicted to be damaging by bioinformatics tools. Multigene panel testing decreased the number of patients that would have otherwise remained genetically unexplained. Besides CDH1, our results demonstrated that GC pathogenic variants are distributed across a number of susceptibility genes and reinforced the emerging link between gastric and breast cancer predisposition.
format Online
Article
Text
id pubmed-6769562
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-67695622019-10-30 Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition Tedaldi, Gianluca Pirini, Francesca Tebaldi, Michela Zampiga, Valentina Cangini, Ilaria Danesi, Rita Arcangeli, Valentina Ravegnani, Mila Abou Khouzam, Raefa Molinari, Chiara Oliveira, Carla Morgagni, Paolo Saragoni, Luca Bencivenga, Maria Ulivi, Paola Amadori, Dino Martinelli, Giovanni Falcini, Fabio Ranzani, Guglielmina Nadia Calistri, Daniele Cancers (Basel) Article The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify novel susceptibility genes, thus improving the management of families at risk, we performed a multigene panel testing on selected patients. We searched for germline pathogenic variants in 94 cancer-related genes in 96 GC or LBC Italian patients with early-onset and/or family history of GC. We found CDH1 pathogenic variants in 10.4% of patients. In 11.5% of cases, we identified loss-of-function variants in BRCA1, BRCA2, PALB2, and ATM breast/ovarian cancer susceptibility genes, as well as in MSH2, PMS2, BMPR1A, PRF1, and BLM genes. In 78.1% of patients, we did not find any variants with clear-cut clinical significance; however, 37.3% of these cases harbored rare missense variants predicted to be damaging by bioinformatics tools. Multigene panel testing decreased the number of patients that would have otherwise remained genetically unexplained. Besides CDH1, our results demonstrated that GC pathogenic variants are distributed across a number of susceptibility genes and reinforced the emerging link between gastric and breast cancer predisposition. MDPI 2019-09-11 /pmc/articles/PMC6769562/ /pubmed/31514334 http://dx.doi.org/10.3390/cancers11091340 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tedaldi, Gianluca
Pirini, Francesca
Tebaldi, Michela
Zampiga, Valentina
Cangini, Ilaria
Danesi, Rita
Arcangeli, Valentina
Ravegnani, Mila
Abou Khouzam, Raefa
Molinari, Chiara
Oliveira, Carla
Morgagni, Paolo
Saragoni, Luca
Bencivenga, Maria
Ulivi, Paola
Amadori, Dino
Martinelli, Giovanni
Falcini, Fabio
Ranzani, Guglielmina Nadia
Calistri, Daniele
Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title_full Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title_fullStr Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title_full_unstemmed Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title_short Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
title_sort multigene panel testing increases the number of loci associated with gastric cancer predisposition
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6769562/
https://www.ncbi.nlm.nih.gov/pubmed/31514334
http://dx.doi.org/10.3390/cancers11091340
work_keys_str_mv AT tedaldigianluca multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT pirinifrancesca multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT tebaldimichela multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT zampigavalentina multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT canginiilaria multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT danesirita multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT arcangelivalentina multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT ravegnanimila multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT aboukhouzamraefa multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT molinarichiara multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT oliveiracarla multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT morgagnipaolo multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT saragoniluca multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT bencivengamaria multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT ulivipaola multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT amadoridino multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT martinelligiovanni multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT falcinifabio multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT ranzaniguglielminanadia multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition
AT calistridaniele multigenepaneltestingincreasesthenumberoflociassociatedwithgastriccancerpredisposition