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Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition
The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify no...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6769562/ https://www.ncbi.nlm.nih.gov/pubmed/31514334 http://dx.doi.org/10.3390/cancers11091340 |
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author | Tedaldi, Gianluca Pirini, Francesca Tebaldi, Michela Zampiga, Valentina Cangini, Ilaria Danesi, Rita Arcangeli, Valentina Ravegnani, Mila Abou Khouzam, Raefa Molinari, Chiara Oliveira, Carla Morgagni, Paolo Saragoni, Luca Bencivenga, Maria Ulivi, Paola Amadori, Dino Martinelli, Giovanni Falcini, Fabio Ranzani, Guglielmina Nadia Calistri, Daniele |
author_facet | Tedaldi, Gianluca Pirini, Francesca Tebaldi, Michela Zampiga, Valentina Cangini, Ilaria Danesi, Rita Arcangeli, Valentina Ravegnani, Mila Abou Khouzam, Raefa Molinari, Chiara Oliveira, Carla Morgagni, Paolo Saragoni, Luca Bencivenga, Maria Ulivi, Paola Amadori, Dino Martinelli, Giovanni Falcini, Fabio Ranzani, Guglielmina Nadia Calistri, Daniele |
author_sort | Tedaldi, Gianluca |
collection | PubMed |
description | The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify novel susceptibility genes, thus improving the management of families at risk, we performed a multigene panel testing on selected patients. We searched for germline pathogenic variants in 94 cancer-related genes in 96 GC or LBC Italian patients with early-onset and/or family history of GC. We found CDH1 pathogenic variants in 10.4% of patients. In 11.5% of cases, we identified loss-of-function variants in BRCA1, BRCA2, PALB2, and ATM breast/ovarian cancer susceptibility genes, as well as in MSH2, PMS2, BMPR1A, PRF1, and BLM genes. In 78.1% of patients, we did not find any variants with clear-cut clinical significance; however, 37.3% of these cases harbored rare missense variants predicted to be damaging by bioinformatics tools. Multigene panel testing decreased the number of patients that would have otherwise remained genetically unexplained. Besides CDH1, our results demonstrated that GC pathogenic variants are distributed across a number of susceptibility genes and reinforced the emerging link between gastric and breast cancer predisposition. |
format | Online Article Text |
id | pubmed-6769562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67695622019-10-30 Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition Tedaldi, Gianluca Pirini, Francesca Tebaldi, Michela Zampiga, Valentina Cangini, Ilaria Danesi, Rita Arcangeli, Valentina Ravegnani, Mila Abou Khouzam, Raefa Molinari, Chiara Oliveira, Carla Morgagni, Paolo Saragoni, Luca Bencivenga, Maria Ulivi, Paola Amadori, Dino Martinelli, Giovanni Falcini, Fabio Ranzani, Guglielmina Nadia Calistri, Daniele Cancers (Basel) Article The main gene involved in gastric cancer (GC) predisposition is CDH1, the pathogenic variants of which are associated with diffuse-type gastric cancer (DGC) and lobular breast cancer (LBC). CDH1 only explains a fraction (10–50%) of patients suspected of DGC/LBC genetic predisposition. To identify novel susceptibility genes, thus improving the management of families at risk, we performed a multigene panel testing on selected patients. We searched for germline pathogenic variants in 94 cancer-related genes in 96 GC or LBC Italian patients with early-onset and/or family history of GC. We found CDH1 pathogenic variants in 10.4% of patients. In 11.5% of cases, we identified loss-of-function variants in BRCA1, BRCA2, PALB2, and ATM breast/ovarian cancer susceptibility genes, as well as in MSH2, PMS2, BMPR1A, PRF1, and BLM genes. In 78.1% of patients, we did not find any variants with clear-cut clinical significance; however, 37.3% of these cases harbored rare missense variants predicted to be damaging by bioinformatics tools. Multigene panel testing decreased the number of patients that would have otherwise remained genetically unexplained. Besides CDH1, our results demonstrated that GC pathogenic variants are distributed across a number of susceptibility genes and reinforced the emerging link between gastric and breast cancer predisposition. MDPI 2019-09-11 /pmc/articles/PMC6769562/ /pubmed/31514334 http://dx.doi.org/10.3390/cancers11091340 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tedaldi, Gianluca Pirini, Francesca Tebaldi, Michela Zampiga, Valentina Cangini, Ilaria Danesi, Rita Arcangeli, Valentina Ravegnani, Mila Abou Khouzam, Raefa Molinari, Chiara Oliveira, Carla Morgagni, Paolo Saragoni, Luca Bencivenga, Maria Ulivi, Paola Amadori, Dino Martinelli, Giovanni Falcini, Fabio Ranzani, Guglielmina Nadia Calistri, Daniele Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title | Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title_full | Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title_fullStr | Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title_full_unstemmed | Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title_short | Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition |
title_sort | multigene panel testing increases the number of loci associated with gastric cancer predisposition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6769562/ https://www.ncbi.nlm.nih.gov/pubmed/31514334 http://dx.doi.org/10.3390/cancers11091340 |
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