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Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice

The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patt...

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Autores principales: Zhang, Qiang, Shen, Lan, Ren, Deyong, Hu, Jiang, Chen, Guang, Zhu, Li, Gao, Zhenyu, Zhang, Guangheng, Guo, Longbiao, Zeng, Dali, Qian, Qian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770982/
https://www.ncbi.nlm.nih.gov/pubmed/31509970
http://dx.doi.org/10.3390/genes10090694
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author Zhang, Qiang
Shen, Lan
Ren, Deyong
Hu, Jiang
Chen, Guang
Zhu, Li
Gao, Zhenyu
Zhang, Guangheng
Guo, Longbiao
Zeng, Dali
Qian, Qian
author_facet Zhang, Qiang
Shen, Lan
Ren, Deyong
Hu, Jiang
Chen, Guang
Zhu, Li
Gao, Zhenyu
Zhang, Guangheng
Guo, Longbiao
Zeng, Dali
Qian, Qian
author_sort Zhang, Qiang
collection PubMed
description The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patterns in different tissues and under abiotic stress, and OsMORF–OsMORF interactions. In this study, we analyzed the gene structure of OsMORF family genes. The MORF family members were divided into six subgroups in different plants based on phylogenetic analysis. Seven OsMORF genes were highly expressed in leaves. Six and seven OsMORF genes expressions were affected by cold and salt stresses, respectively. OsMORF–OsMORF interaction analysis indicated that OsMORF1, OsMORF8a, and OsMORF8b could each interact with themselves to form homomers. Moreover, five OsMORF proteins were shown to be able to interact with each other, such as OsMORF8a and OsMORF8b interacting with OsMORF1 and OsMORF2b, respectively, to form heteromers. These results provide information for further study of OsMORF gene function.
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spelling pubmed-67709822019-10-30 Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice Zhang, Qiang Shen, Lan Ren, Deyong Hu, Jiang Chen, Guang Zhu, Li Gao, Zhenyu Zhang, Guangheng Guo, Longbiao Zeng, Dali Qian, Qian Genes (Basel) Article The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patterns in different tissues and under abiotic stress, and OsMORF–OsMORF interactions. In this study, we analyzed the gene structure of OsMORF family genes. The MORF family members were divided into six subgroups in different plants based on phylogenetic analysis. Seven OsMORF genes were highly expressed in leaves. Six and seven OsMORF genes expressions were affected by cold and salt stresses, respectively. OsMORF–OsMORF interaction analysis indicated that OsMORF1, OsMORF8a, and OsMORF8b could each interact with themselves to form homomers. Moreover, five OsMORF proteins were shown to be able to interact with each other, such as OsMORF8a and OsMORF8b interacting with OsMORF1 and OsMORF2b, respectively, to form heteromers. These results provide information for further study of OsMORF gene function. MDPI 2019-09-10 /pmc/articles/PMC6770982/ /pubmed/31509970 http://dx.doi.org/10.3390/genes10090694 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Qiang
Shen, Lan
Ren, Deyong
Hu, Jiang
Chen, Guang
Zhu, Li
Gao, Zhenyu
Zhang, Guangheng
Guo, Longbiao
Zeng, Dali
Qian, Qian
Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title_full Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title_fullStr Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title_full_unstemmed Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title_short Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
title_sort characterization, expression, and interaction analyses of osmorf gene family in rice
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770982/
https://www.ncbi.nlm.nih.gov/pubmed/31509970
http://dx.doi.org/10.3390/genes10090694
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