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Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice
The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patt...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770982/ https://www.ncbi.nlm.nih.gov/pubmed/31509970 http://dx.doi.org/10.3390/genes10090694 |
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author | Zhang, Qiang Shen, Lan Ren, Deyong Hu, Jiang Chen, Guang Zhu, Li Gao, Zhenyu Zhang, Guangheng Guo, Longbiao Zeng, Dali Qian, Qian |
author_facet | Zhang, Qiang Shen, Lan Ren, Deyong Hu, Jiang Chen, Guang Zhu, Li Gao, Zhenyu Zhang, Guangheng Guo, Longbiao Zeng, Dali Qian, Qian |
author_sort | Zhang, Qiang |
collection | PubMed |
description | The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patterns in different tissues and under abiotic stress, and OsMORF–OsMORF interactions. In this study, we analyzed the gene structure of OsMORF family genes. The MORF family members were divided into six subgroups in different plants based on phylogenetic analysis. Seven OsMORF genes were highly expressed in leaves. Six and seven OsMORF genes expressions were affected by cold and salt stresses, respectively. OsMORF–OsMORF interaction analysis indicated that OsMORF1, OsMORF8a, and OsMORF8b could each interact with themselves to form homomers. Moreover, five OsMORF proteins were shown to be able to interact with each other, such as OsMORF8a and OsMORF8b interacting with OsMORF1 and OsMORF2b, respectively, to form heteromers. These results provide information for further study of OsMORF gene function. |
format | Online Article Text |
id | pubmed-6770982 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67709822019-10-30 Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice Zhang, Qiang Shen, Lan Ren, Deyong Hu, Jiang Chen, Guang Zhu, Li Gao, Zhenyu Zhang, Guangheng Guo, Longbiao Zeng, Dali Qian, Qian Genes (Basel) Article The multiple organellar RNA editing factors (MORF) gene family plays a key role in organelle RNA editing in flowering plants. MORF genes expressions are also affected by abiotic stress. Although seven OsMORF genes have been identified in rice, few reports have been published on their expression patterns in different tissues and under abiotic stress, and OsMORF–OsMORF interactions. In this study, we analyzed the gene structure of OsMORF family genes. The MORF family members were divided into six subgroups in different plants based on phylogenetic analysis. Seven OsMORF genes were highly expressed in leaves. Six and seven OsMORF genes expressions were affected by cold and salt stresses, respectively. OsMORF–OsMORF interaction analysis indicated that OsMORF1, OsMORF8a, and OsMORF8b could each interact with themselves to form homomers. Moreover, five OsMORF proteins were shown to be able to interact with each other, such as OsMORF8a and OsMORF8b interacting with OsMORF1 and OsMORF2b, respectively, to form heteromers. These results provide information for further study of OsMORF gene function. MDPI 2019-09-10 /pmc/articles/PMC6770982/ /pubmed/31509970 http://dx.doi.org/10.3390/genes10090694 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Qiang Shen, Lan Ren, Deyong Hu, Jiang Chen, Guang Zhu, Li Gao, Zhenyu Zhang, Guangheng Guo, Longbiao Zeng, Dali Qian, Qian Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title | Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title_full | Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title_fullStr | Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title_full_unstemmed | Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title_short | Characterization, Expression, and Interaction Analyses of OsMORF Gene Family in Rice |
title_sort | characterization, expression, and interaction analyses of osmorf gene family in rice |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770982/ https://www.ncbi.nlm.nih.gov/pubmed/31509970 http://dx.doi.org/10.3390/genes10090694 |
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