Cargando…

Detecting Large Chromosomal Modifications Using Short Read Data From Genotyping-by-Sequencing

Markers linked to agronomic traits are of the prerequisite for molecular breeding. Genotyping-by-sequencing (GBS) data enables to detect small polymorphisms including single nucleotide polymorphisms (SNPs) and short insertions or deletions (InDels) that can be used, for instance, for marker-assisted...

Descripción completa

Detalles Bibliográficos
Autores principales:	Keilwagen, Jens, Lehnert, Heike, Berner, Thomas, Beier, Sebastian, Scholz, Uwe, Himmelbach, Axel, Stein, Nils, Badaeva, Ekaterina D., Lang, Daniel, Kilian, Benjamin, Hackauf, Bernd, Perovic, Dragan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2019
Materias:	Plant Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771380/ https://www.ncbi.nlm.nih.gov/pubmed/31608087 http://dx.doi.org/10.3389/fpls.2019.01133

Ejemplares similares

Detecting major introgressions in wheat and their putative origins using coverage analysis
por: Keilwagen, Jens, et al.
Publicado: (2022)

Finding needles in a haystack: identification of inter-specific introgressions in wheat genebank collections using low-coverage sequencing data
por: Keilwagen, Jens, et al.
Publicado: (2023)

Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes
por: Beier, Sebastian, et al.
Publicado: (2016)

Comparison Between Core Set Selection Methods Using Different Illumina Marker Platforms: A Case Study of Assessment of Diversity in Wheat
por: Soleimani, Behnaz, et al.
Publicado: (2020)

Mapping-by-sequencing accelerates forward genetics in barley
por: Mascher, Martin, et al.
Publicado: (2014)

Chromosome-scale assembly of wild barley accession “OUH602”
por: Sato, Kazuhiro, et al.
Publicado: (2021)

Chromosomal Passports Provide New Insights into Diffusion of Emmer Wheat
por: Badaeva, Ekaterina D., et al.
Publicado: (2015)

The Terpene Synthase Gene Family of Carrot (Daucus carota L.): Identification of QTLs and Candidate Genes Associated with Terpenoid Volatile Compounds
por: Keilwagen, Jens, et al.
Publicado: (2017)

On genetic diversity in caraway: Genotyping of a large germplasm collection
por: von Maydell, Daniel, et al.
Publicado: (2020)

Evolution of the S-Genomes in Triticum-Aegilops Alliance: Evidences From Chromosome Analysis
por: Ruban, Alevtina S., et al.
Publicado: (2018)

Genome wide association study of frost tolerance in wheat
por: Soleimani, Behnaz, et al.
Publicado: (2022)

Molecular-cytogenetic analysis of Aegilops triuncialis and identification of its chromosomes in the background of wheat
por: Mirzaghaderi, Ghader, et al.
Publicado: (2014)

Drought-Stress-Related Reprogramming of Gene Expression in Barley Involves Differential Histone Modifications at ABA-Related Genes
por: Ost, Charlotte, et al.
Publicado: (2023)

Chromosome-scale assembly of barley cv. ‘Haruna Nijo’ as a resource for barley genetics
por: Sakkour, Areej, et al.
Publicado: (2022)

TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
por: Monat, Cécile, et al.
Publicado: (2019)

Two Rye Genes Responsible for Abnormal Development of Wheat–Rye Hybrids Are Linked in the Vicinity of an Evolutionary Translocation on Chromosome 6R
por: Tsvetkova, Natalia V., et al.
Publicado: (2018)

Supernumerary B chromosomes of Aegilops speltoides undergo precise elimination in roots early in embryo development
por: Ruban, Alevtina, et al.
Publicado: (2020)

High Resolution Mapping of Rph(MBR1012) Conferring Resistance to Puccinia hordei in Barley (Hordeum vulgare L.)
por: Fazlikhani, Leila, et al.
Publicado: (2019)

Rye B chromosomes differently influence the expression of A chromosome–encoded genes depending on the host species
por: Boudichevskaia, Anastassia, et al.
Publicado: (2022)

DivBrowse—interactive visualization and exploratory data analysis of variant call matrices
por: König, Patrick, et al.
Publicado: (2023)

High-Density Linkage Mapping of Agronomic Trait QTLs in Wheat under Water Deficit Condition using Genotyping by Sequencing (GBS)
por: Abdollahi Sisi, Nayyer, et al.
Publicado: (2022)

Mutations in the gene of the Gα subunit of the heterotrimeric G protein are the cause for the brachytic1 semi-dwarf phenotype in barley and applicable for practical breeding
por: Braumann, Ilka, et al.
Publicado: (2017)

A Genome-Wide Association Study Pinpoints Quantitative Trait Genes for Plant Height, Heading Date, Grain Quality, and Yield in Rye (Secale cereale L.)
por: Siekmann, Dörthe, et al.
Publicado: (2021)

Discovery of genes affecting resistance of barley to adapted and non-adapted powdery mildew fungi
por: Douchkov, Dimitar, et al.
Publicado: (2014)

B Chromosomes of Aegilops speltoides Are Enriched in Organelle Genome-Derived Sequences
por: Ruban, Alevtina, et al.
Publicado: (2014)

SNP Diversity and Genetic Structure of “Rogosija”, an Old Western Balkan Durum Wheat Collection
por: Velimirović, Ana, et al.
Publicado: (2023)

Which Factors Affect the Occurrence of Off-Target Effects Caused by the Use of CRISPR/Cas: A Systematic Review in Plants
por: Modrzejewski, Dominik, et al.
Publicado: (2020)

A catalogue of resistance gene homologs and a chromosome‐scale reference sequence support resistance gene mapping in winter wheat
por: Kale, Sandip M., et al.
Publicado: (2022)

Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential
por: Rabanus-Wallace, M. Timothy, et al.
Publicado: (2021)

Improving Yield and Yield Stability in Winter Rye by Hybrid Breeding
por: Hackauf, Bernd, et al.
Publicado: (2022)

Mapping-by-Sequencing Identifies HvPHYTOCHROME C as a Candidate Gene for the early maturity 5 Locus Modulating the Circadian Clock and Photoperiodic Flowering in Barley
por: Pankin, Artem, et al.
Publicado: (2014)

BRIDGE – A Visual Analytics Web Tool for Barley Genebank Genomics
por: König, Patrick, et al.
Publicado: (2020)

Genetic mapping of the powdery mildew resistance gene Pm7 on oat chromosome 5D
por: Brodführer, Sophie, et al.
Publicado: (2023)

High Resolution Genetic and Physical Mapping of a Major Powdery Mildew Resistance Locus in Barley
por: Hoseinzadeh, Parastoo, et al.
Publicado: (2019)

Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data
por: Arumugam, Krithika, et al.
Publicado: (2019)

Association genetics studies on frost tolerance in wheat (Triticum aestivum L.) reveal new highly conserved amino acid substitutions in CBF-A3, CBF-A15, VRN3 and PPD1 genes
por: Babben, Steve, et al.
Publicado: (2018)

Intraspecific divergence of diploid grass Aegilopscomosa is associated with structural chromosome changes
por: Badaeva, Ekaterina D., et al.
Publicado: (2023)

Molecular cytogenetic (FISH) and genome analysis of diploid wheatgrasses and their phylogenetic relationship
por: Linc, Gabriella, et al.
Publicado: (2017)

A chromosome‐scale assembly of the model desiccation tolerant grass Oropetium thomaeum
por: VanBuren, Robert, et al.
Publicado: (2018)

Chromosome and Molecular Analyses Reveal Significant Karyotype Diversity and Provide New Evidence on the Origin of Aegilops columnaris
por: Badaeva, Ekaterina D., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_1co2pr0fdfaorqfu230eorbnq9