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Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes

Colorectal cancer (CRC), prostate cancer (PrC), and gastric cancer (GC) are common worldwide, and the incidence is to a certain extent dependent on genetics. We have recently shown that in families with more than one case of CRC, the risk of other malignancies is increased. We therefore suggested th...

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Autores principales: Wallander, Karin, Liu, Wen, von Holst, Susanna, Thutkawkorapin, Jessada, Kontham, Vinaykumar, Forsberg, Anna, Lindblom, Annika, Lagerstedt‐Robinson, Kristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771512/
https://www.ncbi.nlm.nih.gov/pubmed/31334572
http://dx.doi.org/10.1002/gcc.22786
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author Wallander, Karin
Liu, Wen
von Holst, Susanna
Thutkawkorapin, Jessada
Kontham, Vinaykumar
Forsberg, Anna
Lindblom, Annika
Lagerstedt‐Robinson, Kristina
author_facet Wallander, Karin
Liu, Wen
von Holst, Susanna
Thutkawkorapin, Jessada
Kontham, Vinaykumar
Forsberg, Anna
Lindblom, Annika
Lagerstedt‐Robinson, Kristina
author_sort Wallander, Karin
collection PubMed
description Colorectal cancer (CRC), prostate cancer (PrC), and gastric cancer (GC) are common worldwide, and the incidence is to a certain extent dependent on genetics. We have recently shown that in families with more than one case of CRC, the risk of other malignancies is increased. We therefore suggested the presence of not yet described CRC syndromes. In this study, we have searched for genetic susceptibility loci for potential cancer syndromes involving CRC combined with PrC and/or GC. We have performed SNP (single‐nucleotide polymorphism)‐based linkage analyses in 45 families with CRC, PrC, and GC. In the regions with suggested linkage, we performed exome and association haplotype analyses. Five loci generated a high logarithm of odds (HLOD) score >2, suggestive of linkage, in chromosome bands 1q31‐32, 1q24‐25, 6q25‐26, 18p11‐q11, and Xp11. Exome analysis detected no potential pathogenic sequence variants. The haplotype association study showed that one of the top five haplotypes with the lowest P value in the chromosome band 6q25 interestingly was found in the family which contributed the most to the increased HLOD at that locus. This study supports a suggested hereditary cancer syndrome involving CRC and PrC and indicates a location at 6q25. The impact of this locus needs to be confirmed in additional studies.
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spelling pubmed-67715122019-10-03 Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes Wallander, Karin Liu, Wen von Holst, Susanna Thutkawkorapin, Jessada Kontham, Vinaykumar Forsberg, Anna Lindblom, Annika Lagerstedt‐Robinson, Kristina Genes Chromosomes Cancer Research Articles Colorectal cancer (CRC), prostate cancer (PrC), and gastric cancer (GC) are common worldwide, and the incidence is to a certain extent dependent on genetics. We have recently shown that in families with more than one case of CRC, the risk of other malignancies is increased. We therefore suggested the presence of not yet described CRC syndromes. In this study, we have searched for genetic susceptibility loci for potential cancer syndromes involving CRC combined with PrC and/or GC. We have performed SNP (single‐nucleotide polymorphism)‐based linkage analyses in 45 families with CRC, PrC, and GC. In the regions with suggested linkage, we performed exome and association haplotype analyses. Five loci generated a high logarithm of odds (HLOD) score >2, suggestive of linkage, in chromosome bands 1q31‐32, 1q24‐25, 6q25‐26, 18p11‐q11, and Xp11. Exome analysis detected no potential pathogenic sequence variants. The haplotype association study showed that one of the top five haplotypes with the lowest P value in the chromosome band 6q25 interestingly was found in the family which contributed the most to the increased HLOD at that locus. This study supports a suggested hereditary cancer syndrome involving CRC and PrC and indicates a location at 6q25. The impact of this locus needs to be confirmed in additional studies. John Wiley & Sons, Inc. 2019-08-07 2019-11 /pmc/articles/PMC6771512/ /pubmed/31334572 http://dx.doi.org/10.1002/gcc.22786 Text en © 2019 The Authors. Genes, Chromosomes & Cancer published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Wallander, Karin
Liu, Wen
von Holst, Susanna
Thutkawkorapin, Jessada
Kontham, Vinaykumar
Forsberg, Anna
Lindblom, Annika
Lagerstedt‐Robinson, Kristina
Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title_full Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title_fullStr Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title_full_unstemmed Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title_short Genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
title_sort genetic analyses supporting colorectal, gastric, and prostate cancer syndromes
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771512/
https://www.ncbi.nlm.nih.gov/pubmed/31334572
http://dx.doi.org/10.1002/gcc.22786
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