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Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures

We consider nonparametric and semiparametric resampling of multistate event histories by simulating multistate trajectories from an empirical multivariate hazard measure. One advantage of our approach is that it does not necessarily require individual patient data, but may be based on published info...

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Detalles Bibliográficos
Autores principales: Bluhmki, Tobias, Putter, Hein, Allignol, Arthur, Beyersmann, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771611/
https://www.ncbi.nlm.nih.gov/pubmed/31162707
http://dx.doi.org/10.1002/sim.8177
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author Bluhmki, Tobias
Putter, Hein
Allignol, Arthur
Beyersmann, Jan
author_facet Bluhmki, Tobias
Putter, Hein
Allignol, Arthur
Beyersmann, Jan
author_sort Bluhmki, Tobias
collection PubMed
description We consider nonparametric and semiparametric resampling of multistate event histories by simulating multistate trajectories from an empirical multivariate hazard measure. One advantage of our approach is that it does not necessarily require individual patient data, but may be based on published information. This is also attractive for both study planning and simulating realistic real‐world event history data in general. The concept extends to left‐truncation and right‐censoring mechanisms, nondegenerate initial distributions, and nonproportional as well as non‐Markov settings. A special focus is on its connection to simulating survival data with time‐dependent covariates. For the case of qualitative time‐dependent exposures, we demonstrate that our proposal gives a more natural interpretation of how such data evolve over the course of time than many of the competing approaches. The multistate perspective avoids any latent failure time structure and sampling spaces impossible in real life, whereas its parsimony follows the principle of Occam's razor. We also suggest empirical simulation as a novel bootstrap procedure to assess estimation uncertainty in the absence of individual patient data. This is not possible for established procedures such as Efron's bootstrap. A simulation study investigating the effect of liver functionality on survival in patients with liver cirrhosis serves as a proof of concept. Example code is provided.
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spelling pubmed-67716112019-10-03 Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures Bluhmki, Tobias Putter, Hein Allignol, Arthur Beyersmann, Jan Stat Med Research Articles We consider nonparametric and semiparametric resampling of multistate event histories by simulating multistate trajectories from an empirical multivariate hazard measure. One advantage of our approach is that it does not necessarily require individual patient data, but may be based on published information. This is also attractive for both study planning and simulating realistic real‐world event history data in general. The concept extends to left‐truncation and right‐censoring mechanisms, nondegenerate initial distributions, and nonproportional as well as non‐Markov settings. A special focus is on its connection to simulating survival data with time‐dependent covariates. For the case of qualitative time‐dependent exposures, we demonstrate that our proposal gives a more natural interpretation of how such data evolve over the course of time than many of the competing approaches. The multistate perspective avoids any latent failure time structure and sampling spaces impossible in real life, whereas its parsimony follows the principle of Occam's razor. We also suggest empirical simulation as a novel bootstrap procedure to assess estimation uncertainty in the absence of individual patient data. This is not possible for established procedures such as Efron's bootstrap. A simulation study investigating the effect of liver functionality on survival in patients with liver cirrhosis serves as a proof of concept. Example code is provided. John Wiley and Sons Inc. 2019-06-04 2019-09-10 /pmc/articles/PMC6771611/ /pubmed/31162707 http://dx.doi.org/10.1002/sim.8177 Text en © 2019 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Bluhmki, Tobias
Putter, Hein
Allignol, Arthur
Beyersmann, Jan
Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title_full Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title_fullStr Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title_full_unstemmed Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title_short Bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
title_sort bootstrapping complex time‐to‐event data without individual patient data, with a view toward time‐dependent exposures
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771611/
https://www.ncbi.nlm.nih.gov/pubmed/31162707
http://dx.doi.org/10.1002/sim.8177
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