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Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards

In competing risks setting, we account for death according to a specific cause and the quantities of interest are usually the cause‐specific hazards (CSHs) and the cause‐specific cumulative probabilities. A cause‐specific cumulative probability can be obtained with a combination of the CSHs or via t...

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Autores principales: Kipourou, Dimitra‐Kleio, Charvat, Hadrien, Rachet, Bernard, Belot, Aurélien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771712/
https://www.ncbi.nlm.nih.gov/pubmed/31209905
http://dx.doi.org/10.1002/sim.8209
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author Kipourou, Dimitra‐Kleio
Charvat, Hadrien
Rachet, Bernard
Belot, Aurélien
author_facet Kipourou, Dimitra‐Kleio
Charvat, Hadrien
Rachet, Bernard
Belot, Aurélien
author_sort Kipourou, Dimitra‐Kleio
collection PubMed
description In competing risks setting, we account for death according to a specific cause and the quantities of interest are usually the cause‐specific hazards (CSHs) and the cause‐specific cumulative probabilities. A cause‐specific cumulative probability can be obtained with a combination of the CSHs or via the subdistribution hazard. Here, we modeled the CSH with flexible hazard‐based regression models using B‐splines for the baseline hazard and time‐dependent (TD) effects. We derived the variance of the cause‐specific cumulative probabilities at the population level using the multivariate delta method and showed how we could easily quantify the impact of a covariate on the cumulative probability scale using covariate‐adjusted cause‐specific cumulative probabilities and their difference. We conducted a simulation study to evaluate the performance of this approach in its ability to estimate the cumulative probabilities using different functions for the cause‐specific log baseline hazard and with or without a TD effect. In the scenario with TD effect, we tested both well‐specified and misspecified models. We showed that the flexible regression models perform nearly as well as the nonparametric method, if we allow enough flexibility for the baseline hazards. Moreover, neglecting the TD effect hardly affects the cumulative probabilities estimates of the whole population but impacts them in the various subgroups. We illustrated our approach using data from people diagnosed with monoclonal gammopathy of undetermined significance and provided the R‐code to derive those quantities, as an extension of the R‐package mexhaz.
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spelling pubmed-67717122019-10-07 Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards Kipourou, Dimitra‐Kleio Charvat, Hadrien Rachet, Bernard Belot, Aurélien Stat Med Research Articles In competing risks setting, we account for death according to a specific cause and the quantities of interest are usually the cause‐specific hazards (CSHs) and the cause‐specific cumulative probabilities. A cause‐specific cumulative probability can be obtained with a combination of the CSHs or via the subdistribution hazard. Here, we modeled the CSH with flexible hazard‐based regression models using B‐splines for the baseline hazard and time‐dependent (TD) effects. We derived the variance of the cause‐specific cumulative probabilities at the population level using the multivariate delta method and showed how we could easily quantify the impact of a covariate on the cumulative probability scale using covariate‐adjusted cause‐specific cumulative probabilities and their difference. We conducted a simulation study to evaluate the performance of this approach in its ability to estimate the cumulative probabilities using different functions for the cause‐specific log baseline hazard and with or without a TD effect. In the scenario with TD effect, we tested both well‐specified and misspecified models. We showed that the flexible regression models perform nearly as well as the nonparametric method, if we allow enough flexibility for the baseline hazards. Moreover, neglecting the TD effect hardly affects the cumulative probabilities estimates of the whole population but impacts them in the various subgroups. We illustrated our approach using data from people diagnosed with monoclonal gammopathy of undetermined significance and provided the R‐code to derive those quantities, as an extension of the R‐package mexhaz. John Wiley and Sons Inc. 2019-06-18 2019-09-10 /pmc/articles/PMC6771712/ /pubmed/31209905 http://dx.doi.org/10.1002/sim.8209 Text en © 2019 The Authors Statistics in Medicine Published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Kipourou, Dimitra‐Kleio
Charvat, Hadrien
Rachet, Bernard
Belot, Aurélien
Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title_full Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title_fullStr Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title_full_unstemmed Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title_short Estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
title_sort estimation of the adjusted cause‐specific cumulative probability using flexible regression models for the cause‐specific hazards
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771712/
https://www.ncbi.nlm.nih.gov/pubmed/31209905
http://dx.doi.org/10.1002/sim.8209
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