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The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models
Assessing the calibration of methods for estimating the probability of the occurrence of a binary outcome is an important aspect of validating the performance of risk‐prediction algorithms. Calibration commonly refers to the agreement between predicted and observed probabilities of the outcome. Grap...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771733/ https://www.ncbi.nlm.nih.gov/pubmed/31270850 http://dx.doi.org/10.1002/sim.8281 |
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author | Austin, Peter C. Steyerberg, Ewout W. |
author_facet | Austin, Peter C. Steyerberg, Ewout W. |
author_sort | Austin, Peter C. |
collection | PubMed |
description | Assessing the calibration of methods for estimating the probability of the occurrence of a binary outcome is an important aspect of validating the performance of risk‐prediction algorithms. Calibration commonly refers to the agreement between predicted and observed probabilities of the outcome. Graphical methods are an attractive approach to assess calibration, in which observed and predicted probabilities are compared using loess‐based smoothing functions. We describe the Integrated Calibration Index (ICI) that is motivated by Harrell's E(max) index, which is the maximum absolute difference between a smooth calibration curve and the diagonal line of perfect calibration. The ICI can be interpreted as weighted difference between observed and predicted probabilities, in which observations are weighted by the empirical density function of the predicted probabilities. As such, the ICI is a measure of calibration that explicitly incorporates the distribution of predicted probabilities. We also discuss two related measures of calibration, E50 and E90, which represent the median and 90th percentile of the absolute difference between observed and predicted probabilities. We illustrate the utility of the ICI, E50, and E90 by using them to compare the calibration of logistic regression with that of random forests and boosted regression trees for predicting mortality in patients hospitalized with a heart attack. The use of these numeric metrics permitted for a greater differentiation in calibration than was permissible by visual inspection of graphical calibration curves. |
format | Online Article Text |
id | pubmed-6771733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67717332019-10-07 The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models Austin, Peter C. Steyerberg, Ewout W. Stat Med Research Articles Assessing the calibration of methods for estimating the probability of the occurrence of a binary outcome is an important aspect of validating the performance of risk‐prediction algorithms. Calibration commonly refers to the agreement between predicted and observed probabilities of the outcome. Graphical methods are an attractive approach to assess calibration, in which observed and predicted probabilities are compared using loess‐based smoothing functions. We describe the Integrated Calibration Index (ICI) that is motivated by Harrell's E(max) index, which is the maximum absolute difference between a smooth calibration curve and the diagonal line of perfect calibration. The ICI can be interpreted as weighted difference between observed and predicted probabilities, in which observations are weighted by the empirical density function of the predicted probabilities. As such, the ICI is a measure of calibration that explicitly incorporates the distribution of predicted probabilities. We also discuss two related measures of calibration, E50 and E90, which represent the median and 90th percentile of the absolute difference between observed and predicted probabilities. We illustrate the utility of the ICI, E50, and E90 by using them to compare the calibration of logistic regression with that of random forests and boosted regression trees for predicting mortality in patients hospitalized with a heart attack. The use of these numeric metrics permitted for a greater differentiation in calibration than was permissible by visual inspection of graphical calibration curves. John Wiley and Sons Inc. 2019-07-03 2019-09-20 /pmc/articles/PMC6771733/ /pubmed/31270850 http://dx.doi.org/10.1002/sim.8281 Text en © 2019 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Austin, Peter C. Steyerberg, Ewout W. The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title | The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title_full | The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title_fullStr | The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title_full_unstemmed | The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title_short | The Integrated Calibration Index (ICI) and related metrics for quantifying the calibration of logistic regression models |
title_sort | integrated calibration index (ici) and related metrics for quantifying the calibration of logistic regression models |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771733/ https://www.ncbi.nlm.nih.gov/pubmed/31270850 http://dx.doi.org/10.1002/sim.8281 |
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