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Aerial-trained deep learning networks for surveying cetaceans from satellite imagery
Most cetacean species are wide-ranging and highly mobile, creating significant challenges for researchers by limiting the scope of data that can be collected and leaving large areas un-surveyed. Aerial surveys have proven an effective way to locate and study cetacean movements but are costly and lim...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772036/ https://www.ncbi.nlm.nih.gov/pubmed/31574136 http://dx.doi.org/10.1371/journal.pone.0212532 |
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author | Borowicz, Alex Le, Hieu Humphries, Grant Nehls, Georg Höschle, Caroline Kosarev, Vladislav Lynch, Heather J. |
author_facet | Borowicz, Alex Le, Hieu Humphries, Grant Nehls, Georg Höschle, Caroline Kosarev, Vladislav Lynch, Heather J. |
author_sort | Borowicz, Alex |
collection | PubMed |
description | Most cetacean species are wide-ranging and highly mobile, creating significant challenges for researchers by limiting the scope of data that can be collected and leaving large areas un-surveyed. Aerial surveys have proven an effective way to locate and study cetacean movements but are costly and limited in spatial extent. Here we present a semi-automated pipeline for whale detection from very high-resolution (sub-meter) satellite imagery that makes use of a convolutional neural network (CNN). We trained ResNet, and DenseNet CNNs using down-scaled aerial imagery and tested each model on 31 cm-resolution imagery obtained from the WorldView-3 sensor. Satellite imagery was tiled and the trained algorithms were used to classify whether or not a tile was likely to contain a whale. Our best model correctly classified 100% of tiles with whales, and 94% of tiles containing only water. All model architectures performed well, with learning rate controlling performance more than architecture. While the resolution of commercially-available satellite imagery continues to make whale identification a challenging problem, our approach provides the means to efficiently eliminate areas without whales and, in doing so, greatly accelerates ocean surveys for large cetaceans. |
format | Online Article Text |
id | pubmed-6772036 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-67720362019-10-12 Aerial-trained deep learning networks for surveying cetaceans from satellite imagery Borowicz, Alex Le, Hieu Humphries, Grant Nehls, Georg Höschle, Caroline Kosarev, Vladislav Lynch, Heather J. PLoS One Research Article Most cetacean species are wide-ranging and highly mobile, creating significant challenges for researchers by limiting the scope of data that can be collected and leaving large areas un-surveyed. Aerial surveys have proven an effective way to locate and study cetacean movements but are costly and limited in spatial extent. Here we present a semi-automated pipeline for whale detection from very high-resolution (sub-meter) satellite imagery that makes use of a convolutional neural network (CNN). We trained ResNet, and DenseNet CNNs using down-scaled aerial imagery and tested each model on 31 cm-resolution imagery obtained from the WorldView-3 sensor. Satellite imagery was tiled and the trained algorithms were used to classify whether or not a tile was likely to contain a whale. Our best model correctly classified 100% of tiles with whales, and 94% of tiles containing only water. All model architectures performed well, with learning rate controlling performance more than architecture. While the resolution of commercially-available satellite imagery continues to make whale identification a challenging problem, our approach provides the means to efficiently eliminate areas without whales and, in doing so, greatly accelerates ocean surveys for large cetaceans. Public Library of Science 2019-10-01 /pmc/articles/PMC6772036/ /pubmed/31574136 http://dx.doi.org/10.1371/journal.pone.0212532 Text en © 2019 Borowicz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Borowicz, Alex Le, Hieu Humphries, Grant Nehls, Georg Höschle, Caroline Kosarev, Vladislav Lynch, Heather J. Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title | Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title_full | Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title_fullStr | Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title_full_unstemmed | Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title_short | Aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
title_sort | aerial-trained deep learning networks for surveying cetaceans from satellite imagery |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772036/ https://www.ncbi.nlm.nih.gov/pubmed/31574136 http://dx.doi.org/10.1371/journal.pone.0212532 |
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