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Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling v...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772100/ https://www.ncbi.nlm.nih.gov/pubmed/31183893 http://dx.doi.org/10.1002/mrm.27822 |
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author | Moser, Philipp Bogner, Wolfgang Hingerl, Lukas Heckova, Eva Hangel, Gilbert Motyka, Stanislav Trattnig, Siegfried Strasser, Bernhard |
author_facet | Moser, Philipp Bogner, Wolfgang Hingerl, Lukas Heckova, Eva Hangel, Gilbert Motyka, Stanislav Trattnig, Siegfried Strasser, Bernhard |
author_sort | Moser, Philipp |
collection | PubMed |
description | PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling via concentric rings, we implemented additional, non‐Cartesian, hybrid through‐time/through‐k‐space (tt/tk)‐generalized autocalibrating partially parallel acquisition (GRAPPA). A new multipurpose interleaved calibration scan (interleaved MUSICAL) acquires reference data for both coil combination and PI. This renders the reconstruction process (especially PI) less sensitive to instabilities. METHODS: Six healthy volunteers were scanned at 7T. Three calibration datasets for coil combination and PI were recorded: a) iMUSICAL, b) static MUSICAL as prescan, c) moved MUSICAL as prescan with misaligned head position. The coil combination performance, including motion sensitivity, of iMUSICAL was compared to MUSICAL for single‐slice free induction decay (FID)‐MRSI. Through‐time/through‐k‐space‐GRAPPA with constant/variable‐density undersampling was evaluated on the same data, comparing the three calibration datasets. Additionally, the proposed method was successfully applied to 3D whole‐brain FID‐MRSI. RESULTS: Using iMUSICAL for coil combination yielded the highest signal‐to‐noise ratio (SNR) (+9%) and lowest Cramer‐Rao lower bounds (CRLBs) (‐6%) compared to both MUSICAL approaches, with similar metabolic map quality. Also, excellent mean g‐factors of 1.07 and low residual lipid aliasing were obtained when using iMUSICAL as calibration data for two‐fold, variable‐density undersampling, while significantly degraded metabolic maps were obtained using the misaligned MUSICAL calibration data. CONCLUSION: Through‐time/through‐k‐space‐GRAPPA can accelerate already time‐efficient non‐Cartesian spatial‐spectral 2D/3D‐MRSI encoding even further. Particularly promising results have been achieved using iMUSICAL as a robust, interleaved multipurpose calibration for MRSI reconstruction, without extra calibration prescan. |
format | Online Article Text |
id | pubmed-6772100 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67721002019-10-07 Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T Moser, Philipp Bogner, Wolfgang Hingerl, Lukas Heckova, Eva Hangel, Gilbert Motyka, Stanislav Trattnig, Siegfried Strasser, Bernhard Magn Reson Med Full Paper—Spectroscopic Methodology PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling via concentric rings, we implemented additional, non‐Cartesian, hybrid through‐time/through‐k‐space (tt/tk)‐generalized autocalibrating partially parallel acquisition (GRAPPA). A new multipurpose interleaved calibration scan (interleaved MUSICAL) acquires reference data for both coil combination and PI. This renders the reconstruction process (especially PI) less sensitive to instabilities. METHODS: Six healthy volunteers were scanned at 7T. Three calibration datasets for coil combination and PI were recorded: a) iMUSICAL, b) static MUSICAL as prescan, c) moved MUSICAL as prescan with misaligned head position. The coil combination performance, including motion sensitivity, of iMUSICAL was compared to MUSICAL for single‐slice free induction decay (FID)‐MRSI. Through‐time/through‐k‐space‐GRAPPA with constant/variable‐density undersampling was evaluated on the same data, comparing the three calibration datasets. Additionally, the proposed method was successfully applied to 3D whole‐brain FID‐MRSI. RESULTS: Using iMUSICAL for coil combination yielded the highest signal‐to‐noise ratio (SNR) (+9%) and lowest Cramer‐Rao lower bounds (CRLBs) (‐6%) compared to both MUSICAL approaches, with similar metabolic map quality. Also, excellent mean g‐factors of 1.07 and low residual lipid aliasing were obtained when using iMUSICAL as calibration data for two‐fold, variable‐density undersampling, while significantly degraded metabolic maps were obtained using the misaligned MUSICAL calibration data. CONCLUSION: Through‐time/through‐k‐space‐GRAPPA can accelerate already time‐efficient non‐Cartesian spatial‐spectral 2D/3D‐MRSI encoding even further. Particularly promising results have been achieved using iMUSICAL as a robust, interleaved multipurpose calibration for MRSI reconstruction, without extra calibration prescan. John Wiley and Sons Inc. 2019-06-10 2019-11 /pmc/articles/PMC6772100/ /pubmed/31183893 http://dx.doi.org/10.1002/mrm.27822 Text en © 2019 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Paper—Spectroscopic Methodology Moser, Philipp Bogner, Wolfgang Hingerl, Lukas Heckova, Eva Hangel, Gilbert Motyka, Stanislav Trattnig, Siegfried Strasser, Bernhard Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title | Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title_full | Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title_fullStr | Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title_full_unstemmed | Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title_short | Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T |
title_sort | non‐cartesian grappa and coil combination using interleaved calibration data – application to concentric‐ring mrsi of the human brain at 7t |
topic | Full Paper—Spectroscopic Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772100/ https://www.ncbi.nlm.nih.gov/pubmed/31183893 http://dx.doi.org/10.1002/mrm.27822 |
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