Cargando…

Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T

PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling v...

Descripción completa

Detalles Bibliográficos
Autores principales: Moser, Philipp, Bogner, Wolfgang, Hingerl, Lukas, Heckova, Eva, Hangel, Gilbert, Motyka, Stanislav, Trattnig, Siegfried, Strasser, Bernhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772100/
https://www.ncbi.nlm.nih.gov/pubmed/31183893
http://dx.doi.org/10.1002/mrm.27822
_version_ 1783455836241133568
author Moser, Philipp
Bogner, Wolfgang
Hingerl, Lukas
Heckova, Eva
Hangel, Gilbert
Motyka, Stanislav
Trattnig, Siegfried
Strasser, Bernhard
author_facet Moser, Philipp
Bogner, Wolfgang
Hingerl, Lukas
Heckova, Eva
Hangel, Gilbert
Motyka, Stanislav
Trattnig, Siegfried
Strasser, Bernhard
author_sort Moser, Philipp
collection PubMed
description PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling via concentric rings, we implemented additional, non‐Cartesian, hybrid through‐time/through‐k‐space (tt/tk)‐generalized autocalibrating partially parallel acquisition (GRAPPA). A new multipurpose interleaved calibration scan (interleaved MUSICAL) acquires reference data for both coil combination and PI. This renders the reconstruction process (especially PI) less sensitive to instabilities. METHODS: Six healthy volunteers were scanned at 7T. Three calibration datasets for coil combination and PI were recorded: a) iMUSICAL, b) static MUSICAL as prescan, c) moved MUSICAL as prescan with misaligned head position. The coil combination performance, including motion sensitivity, of iMUSICAL was compared to MUSICAL for single‐slice free induction decay (FID)‐MRSI. Through‐time/through‐k‐space‐GRAPPA with constant/variable‐density undersampling was evaluated on the same data, comparing the three calibration datasets. Additionally, the proposed method was successfully applied to 3D whole‐brain FID‐MRSI. RESULTS: Using iMUSICAL for coil combination yielded the highest signal‐to‐noise ratio (SNR) (+9%) and lowest Cramer‐Rao lower bounds (CRLBs) (‐6%) compared to both MUSICAL approaches, with similar metabolic map quality. Also, excellent mean g‐factors of 1.07 and low residual lipid aliasing were obtained when using iMUSICAL as calibration data for two‐fold, variable‐density undersampling, while significantly degraded metabolic maps were obtained using the misaligned MUSICAL calibration data. CONCLUSION: Through‐time/through‐k‐space‐GRAPPA can accelerate already time‐efficient non‐Cartesian spatial‐spectral 2D/3D‐MRSI encoding even further. Particularly promising results have been achieved using iMUSICAL as a robust, interleaved multipurpose calibration for MRSI reconstruction, without extra calibration prescan.
format Online
Article
Text
id pubmed-6772100
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-67721002019-10-07 Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T Moser, Philipp Bogner, Wolfgang Hingerl, Lukas Heckova, Eva Hangel, Gilbert Motyka, Stanislav Trattnig, Siegfried Strasser, Bernhard Magn Reson Med Full Paper—Spectroscopic Methodology PURPOSE: Proton MR spectroscopic imaging (MRSI) benefits from B (0 )≥ 7T and multichannel receive coils, promising substantial resolution improvements. However, MRSI acquisition with high spatial resolution requires efficient acceleration and coil combination. To speed up the already‐fast sampling via concentric rings, we implemented additional, non‐Cartesian, hybrid through‐time/through‐k‐space (tt/tk)‐generalized autocalibrating partially parallel acquisition (GRAPPA). A new multipurpose interleaved calibration scan (interleaved MUSICAL) acquires reference data for both coil combination and PI. This renders the reconstruction process (especially PI) less sensitive to instabilities. METHODS: Six healthy volunteers were scanned at 7T. Three calibration datasets for coil combination and PI were recorded: a) iMUSICAL, b) static MUSICAL as prescan, c) moved MUSICAL as prescan with misaligned head position. The coil combination performance, including motion sensitivity, of iMUSICAL was compared to MUSICAL for single‐slice free induction decay (FID)‐MRSI. Through‐time/through‐k‐space‐GRAPPA with constant/variable‐density undersampling was evaluated on the same data, comparing the three calibration datasets. Additionally, the proposed method was successfully applied to 3D whole‐brain FID‐MRSI. RESULTS: Using iMUSICAL for coil combination yielded the highest signal‐to‐noise ratio (SNR) (+9%) and lowest Cramer‐Rao lower bounds (CRLBs) (‐6%) compared to both MUSICAL approaches, with similar metabolic map quality. Also, excellent mean g‐factors of 1.07 and low residual lipid aliasing were obtained when using iMUSICAL as calibration data for two‐fold, variable‐density undersampling, while significantly degraded metabolic maps were obtained using the misaligned MUSICAL calibration data. CONCLUSION: Through‐time/through‐k‐space‐GRAPPA can accelerate already time‐efficient non‐Cartesian spatial‐spectral 2D/3D‐MRSI encoding even further. Particularly promising results have been achieved using iMUSICAL as a robust, interleaved multipurpose calibration for MRSI reconstruction, without extra calibration prescan. John Wiley and Sons Inc. 2019-06-10 2019-11 /pmc/articles/PMC6772100/ /pubmed/31183893 http://dx.doi.org/10.1002/mrm.27822 Text en © 2019 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Paper—Spectroscopic Methodology
Moser, Philipp
Bogner, Wolfgang
Hingerl, Lukas
Heckova, Eva
Hangel, Gilbert
Motyka, Stanislav
Trattnig, Siegfried
Strasser, Bernhard
Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title_full Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title_fullStr Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title_full_unstemmed Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title_short Non‐Cartesian GRAPPA and coil combination using interleaved calibration data – application to concentric‐ring MRSI of the human brain at 7T
title_sort non‐cartesian grappa and coil combination using interleaved calibration data – application to concentric‐ring mrsi of the human brain at 7t
topic Full Paper—Spectroscopic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6772100/
https://www.ncbi.nlm.nih.gov/pubmed/31183893
http://dx.doi.org/10.1002/mrm.27822
work_keys_str_mv AT moserphilipp noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT bognerwolfgang noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT hingerllukas noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT heckovaeva noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT hangelgilbert noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT motykastanislav noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT trattnigsiegfried noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t
AT strasserbernhard noncartesiangrappaandcoilcombinationusinginterleavedcalibrationdataapplicationtoconcentricringmrsiofthehumanbrainat7t