Cargando…

Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots

Electron and proton transfer reactions in enzymes are enigmatic and have attracted a great deal of theoretical, experimental, and practical attention. The oxidoreductases provide model systems for testing theoretical predictions, applying experimental techniques to gain insight into catalytic mechan...

Descripción completa

Detalles Bibliográficos
Autores principales: Laurynėnas, Audrius, Butkevičius, Marius, Dagys, Marius, Shleev, Sergey, Kulys, Juozas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6773748/
https://www.ncbi.nlm.nih.gov/pubmed/31575893
http://dx.doi.org/10.1038/s41598-019-50466-9
_version_ 1783455943868022784
author Laurynėnas, Audrius
Butkevičius, Marius
Dagys, Marius
Shleev, Sergey
Kulys, Juozas
author_facet Laurynėnas, Audrius
Butkevičius, Marius
Dagys, Marius
Shleev, Sergey
Kulys, Juozas
author_sort Laurynėnas, Audrius
collection PubMed
description Electron and proton transfer reactions in enzymes are enigmatic and have attracted a great deal of theoretical, experimental, and practical attention. The oxidoreductases provide model systems for testing theoretical predictions, applying experimental techniques to gain insight into catalytic mechanisms, and creating industrially important bio(electro)conversion processes. Most previous and ongoing research on enzymatic electron transfer has exploited a theoretically and practically sound but limited approach that uses a series of structurally similar (“homologous”) substrates, measures reaction rate constants and Gibbs free energies of reactions, and analyses trends predicted by electron transfer theory. This approach, proposed half a century ago, is based on a hitherto unproved hypothesis that pre-exponential factors of rate constants are similar for homologous substrates. Here, we propose a novel approach to investigating electron and proton transfer catalysed by oxidoreductases. We demonstrate the validity of this new approach for elucidating the kinetics of oxidation of “non-homologous” substrates catalysed by compound II of Coprinopsis cinerea and Armoracia rusticana peroxidases. This study – using the Marcus theory – demonstrates that reactions are not only limited by electron transfer, but a proton is transferred after the electron transfer event and thus both events control the reaction rate of peroxidase-catalysed oxidation of substrates.
format Online
Article
Text
id pubmed-6773748
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-67737482019-10-04 Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots Laurynėnas, Audrius Butkevičius, Marius Dagys, Marius Shleev, Sergey Kulys, Juozas Sci Rep Article Electron and proton transfer reactions in enzymes are enigmatic and have attracted a great deal of theoretical, experimental, and practical attention. The oxidoreductases provide model systems for testing theoretical predictions, applying experimental techniques to gain insight into catalytic mechanisms, and creating industrially important bio(electro)conversion processes. Most previous and ongoing research on enzymatic electron transfer has exploited a theoretically and practically sound but limited approach that uses a series of structurally similar (“homologous”) substrates, measures reaction rate constants and Gibbs free energies of reactions, and analyses trends predicted by electron transfer theory. This approach, proposed half a century ago, is based on a hitherto unproved hypothesis that pre-exponential factors of rate constants are similar for homologous substrates. Here, we propose a novel approach to investigating electron and proton transfer catalysed by oxidoreductases. We demonstrate the validity of this new approach for elucidating the kinetics of oxidation of “non-homologous” substrates catalysed by compound II of Coprinopsis cinerea and Armoracia rusticana peroxidases. This study – using the Marcus theory – demonstrates that reactions are not only limited by electron transfer, but a proton is transferred after the electron transfer event and thus both events control the reaction rate of peroxidase-catalysed oxidation of substrates. Nature Publishing Group UK 2019-10-01 /pmc/articles/PMC6773748/ /pubmed/31575893 http://dx.doi.org/10.1038/s41598-019-50466-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Laurynėnas, Audrius
Butkevičius, Marius
Dagys, Marius
Shleev, Sergey
Kulys, Juozas
Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title_full Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title_fullStr Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title_full_unstemmed Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title_short Consecutive Marcus Electron and Proton Transfer in Heme Peroxidase Compound II-Catalysed Oxidation Revealed by Arrhenius Plots
title_sort consecutive marcus electron and proton transfer in heme peroxidase compound ii-catalysed oxidation revealed by arrhenius plots
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6773748/
https://www.ncbi.nlm.nih.gov/pubmed/31575893
http://dx.doi.org/10.1038/s41598-019-50466-9
work_keys_str_mv AT laurynenasaudrius consecutivemarcuselectronandprotontransferinhemeperoxidasecompoundiicatalysedoxidationrevealedbyarrheniusplots
AT butkeviciusmarius consecutivemarcuselectronandprotontransferinhemeperoxidasecompoundiicatalysedoxidationrevealedbyarrheniusplots
AT dagysmarius consecutivemarcuselectronandprotontransferinhemeperoxidasecompoundiicatalysedoxidationrevealedbyarrheniusplots
AT shleevsergey consecutivemarcuselectronandprotontransferinhemeperoxidasecompoundiicatalysedoxidationrevealedbyarrheniusplots
AT kulysjuozas consecutivemarcuselectronandprotontransferinhemeperoxidasecompoundiicatalysedoxidationrevealedbyarrheniusplots