Cargando…

Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)

Detalles Bibliográficos
Autores principales: Gan, Han Ming, Tan, Mun Hua, Austin, Christopher M., Sherman, Craig D. H., Wong, Yen Ting, Strugnell, Jan, Gervis, Mark, McPherson, Luke, Miller, Adam D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6774278/
https://www.ncbi.nlm.nih.gov/pubmed/31608118
http://dx.doi.org/10.3389/fgene.2019.00889
_version_ 1783456050887786496
author Gan, Han Ming
Tan, Mun Hua
Austin, Christopher M.
Sherman, Craig D. H.
Wong, Yen Ting
Strugnell, Jan
Gervis, Mark
McPherson, Luke
Miller, Adam D.
author_facet Gan, Han Ming
Tan, Mun Hua
Austin, Christopher M.
Sherman, Craig D. H.
Wong, Yen Ting
Strugnell, Jan
Gervis, Mark
McPherson, Luke
Miller, Adam D.
author_sort Gan, Han Ming
collection PubMed
description
format Online
Article
Text
id pubmed-6774278
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-67742782019-10-13 Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra) Gan, Han Ming Tan, Mun Hua Austin, Christopher M. Sherman, Craig D. H. Wong, Yen Ting Strugnell, Jan Gervis, Mark McPherson, Luke Miller, Adam D. Front Genet Genetics Frontiers Media S.A. 2019-09-25 /pmc/articles/PMC6774278/ /pubmed/31608118 http://dx.doi.org/10.3389/fgene.2019.00889 Text en Copyright © 2019 Gan, Tan, Austin, Sherman, Wong, Strugnell, Gervis, McPherson and Miller http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Gan, Han Ming
Tan, Mun Hua
Austin, Christopher M.
Sherman, Craig D. H.
Wong, Yen Ting
Strugnell, Jan
Gervis, Mark
McPherson, Luke
Miller, Adam D.
Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title_full Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title_fullStr Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title_full_unstemmed Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title_short Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)
title_sort best foot forward: nanopore long reads, hybrid meta-assembly, and haplotig purging optimizes the first genome assembly for the southern hemisphere blacklip abalone (haliotis rubra)
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6774278/
https://www.ncbi.nlm.nih.gov/pubmed/31608118
http://dx.doi.org/10.3389/fgene.2019.00889
work_keys_str_mv AT ganhanming bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT tanmunhua bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT austinchristopherm bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT shermancraigdh bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT wongyenting bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT strugnelljan bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT gervismark bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT mcphersonluke bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra
AT milleradamd bestfootforwardnanoporelongreadshybridmetaassemblyandhaplotigpurgingoptimizesthefirstgenomeassemblyforthesouthernhemisphereblacklipabalonehaliotisrubra