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Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study

Objective: In this study, we exploited a VGG-16 deep convolutional neural network (DCNN) model to differentiate papillary thyroid carcinoma (PTC) from benign thyroid nodules using cytological images. Methods: A pathology-proven dataset was built from 279 cytological images of thyroid nodules. The im...

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Autores principales: Guan, Qing, Wang, Yunjun, Ping, Bo, Li, Duanshu, Du, Jiajun, Qin, Yu, Lu, Hongtao, Wan, Xiaochun, Xiang, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775529/
https://www.ncbi.nlm.nih.gov/pubmed/31598159
http://dx.doi.org/10.7150/jca.28769
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author Guan, Qing
Wang, Yunjun
Ping, Bo
Li, Duanshu
Du, Jiajun
Qin, Yu
Lu, Hongtao
Wan, Xiaochun
Xiang, Jun
author_facet Guan, Qing
Wang, Yunjun
Ping, Bo
Li, Duanshu
Du, Jiajun
Qin, Yu
Lu, Hongtao
Wan, Xiaochun
Xiang, Jun
author_sort Guan, Qing
collection PubMed
description Objective: In this study, we exploited a VGG-16 deep convolutional neural network (DCNN) model to differentiate papillary thyroid carcinoma (PTC) from benign thyroid nodules using cytological images. Methods: A pathology-proven dataset was built from 279 cytological images of thyroid nodules. The images were cropped into fragmented images and divided into a training dataset and a test dataset. VGG-16 and Inception-v3 DCNNs were trained and tested to make differential diagnoses. The characteristics of tumor cell nucleus were quantified as contours, perimeter, area and mean of pixel intensity and compared using independent Student's t-tests. Results: In the test group, the accuracy rates of the VGG-16 model and Inception-v3 on fragmented images were 97.66% and 92.75%, respectively, and the accuracy rates of VGG-16 and Inception-v3 in patients were 95% and 87.5%, respectively. The contours, perimeter, area and mean of pixel intensity of PTC in fragmented images were more than the benign nodules, which were 61.01±17.10 vs 47.00±24.08, p=0.000, 134.99±21.42 vs 62.40±29.15, p=0.000, 1770.89±627.22 vs 1157.27±722.23, p=0.013, 165.84±26.33 vs 132.94±28.73, p=0.000), respectively. Conclusion: In summary, after training with a large dataset, the DCNN VGG-16 model showed great potential in facilitating PTC diagnosis from cytological images. The contours, perimeter, area and mean of pixel intensity of PTC in fragmented images were more than the benign nodules.
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spelling pubmed-67755292019-10-09 Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study Guan, Qing Wang, Yunjun Ping, Bo Li, Duanshu Du, Jiajun Qin, Yu Lu, Hongtao Wan, Xiaochun Xiang, Jun J Cancer Research Paper Objective: In this study, we exploited a VGG-16 deep convolutional neural network (DCNN) model to differentiate papillary thyroid carcinoma (PTC) from benign thyroid nodules using cytological images. Methods: A pathology-proven dataset was built from 279 cytological images of thyroid nodules. The images were cropped into fragmented images and divided into a training dataset and a test dataset. VGG-16 and Inception-v3 DCNNs were trained and tested to make differential diagnoses. The characteristics of tumor cell nucleus were quantified as contours, perimeter, area and mean of pixel intensity and compared using independent Student's t-tests. Results: In the test group, the accuracy rates of the VGG-16 model and Inception-v3 on fragmented images were 97.66% and 92.75%, respectively, and the accuracy rates of VGG-16 and Inception-v3 in patients were 95% and 87.5%, respectively. The contours, perimeter, area and mean of pixel intensity of PTC in fragmented images were more than the benign nodules, which were 61.01±17.10 vs 47.00±24.08, p=0.000, 134.99±21.42 vs 62.40±29.15, p=0.000, 1770.89±627.22 vs 1157.27±722.23, p=0.013, 165.84±26.33 vs 132.94±28.73, p=0.000), respectively. Conclusion: In summary, after training with a large dataset, the DCNN VGG-16 model showed great potential in facilitating PTC diagnosis from cytological images. The contours, perimeter, area and mean of pixel intensity of PTC in fragmented images were more than the benign nodules. Ivyspring International Publisher 2019-08-27 /pmc/articles/PMC6775529/ /pubmed/31598159 http://dx.doi.org/10.7150/jca.28769 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Guan, Qing
Wang, Yunjun
Ping, Bo
Li, Duanshu
Du, Jiajun
Qin, Yu
Lu, Hongtao
Wan, Xiaochun
Xiang, Jun
Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title_full Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title_fullStr Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title_full_unstemmed Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title_short Deep convolutional neural network VGG-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
title_sort deep convolutional neural network vgg-16 model for differential diagnosing of papillary thyroid carcinomas in cytological images: a pilot study
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775529/
https://www.ncbi.nlm.nih.gov/pubmed/31598159
http://dx.doi.org/10.7150/jca.28769
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