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Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model

Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established base...

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Autores principales: Wang, Wei, Ding, Mingcui, Duan, Xiaoran, Feng, Xiaolei, Wang, Pengpeng, Jiang, Qingfeng, Cheng, Zhe, Zhang, Wenjuan, Yu, Songcheng, Yao, Wu, Cui, Liuxin, Wu, Yongjun, Feng, Feifei, Yang, Yongli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775617/
https://www.ncbi.nlm.nih.gov/pubmed/31602261
http://dx.doi.org/10.7150/jca.30528
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author Wang, Wei
Ding, Mingcui
Duan, Xiaoran
Feng, Xiaolei
Wang, Pengpeng
Jiang, Qingfeng
Cheng, Zhe
Zhang, Wenjuan
Yu, Songcheng
Yao, Wu
Cui, Liuxin
Wu, Yongjun
Feng, Feifei
Yang, Yongli
author_facet Wang, Wei
Ding, Mingcui
Duan, Xiaoran
Feng, Xiaolei
Wang, Pengpeng
Jiang, Qingfeng
Cheng, Zhe
Zhang, Wenjuan
Yu, Songcheng
Yao, Wu
Cui, Liuxin
Wu, Yongjun
Feng, Feifei
Yang, Yongli
author_sort Wang, Wei
collection PubMed
description Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established based on plasma miRNAs biomarkers, clinical symptoms and epidemiology material. Methods: The expressions of plasma miRNA were examined with SYBR Green-based quantitative real-time PCR. Results: We identified that the expressions of 10 plasma miRNAs (miR-21, miR-20a, miR-210, miR-145, miR-126, miR-223, miR-197, miR-30a, miR-30d, miR-25), smoking status, fever, cough, chest pain or tightness, bloody phlegm, haemoptysis, were significantly different between lung cancer and control groups (P<0.05). The accuracies of the combined SVM, miRNAs SVM, symptom SVM, combined Fisher, miRNAs Fisher and symptom Fisher were 96.34%, 80.49%, 84.15%, 84.15%, 75.61%, and 80.49%, respectively; AUC of these six model were 0.976, 0.841, 0.838, 0.865, 0.750, and 0.801, respectively. The accuracy and AUC of combined SVM were higher than the other 5 models (P<0.05). Conclusions: Our findings indicate that SVM model based on plasma miRNAs biomarkers may serve as a novel, accurate, noninvasive method for auxiliary diagnosis of lung cancer.
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spelling pubmed-67756172019-10-10 Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model Wang, Wei Ding, Mingcui Duan, Xiaoran Feng, Xiaolei Wang, Pengpeng Jiang, Qingfeng Cheng, Zhe Zhang, Wenjuan Yu, Songcheng Yao, Wu Cui, Liuxin Wu, Yongjun Feng, Feifei Yang, Yongli J Cancer Research Paper Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established based on plasma miRNAs biomarkers, clinical symptoms and epidemiology material. Methods: The expressions of plasma miRNA were examined with SYBR Green-based quantitative real-time PCR. Results: We identified that the expressions of 10 plasma miRNAs (miR-21, miR-20a, miR-210, miR-145, miR-126, miR-223, miR-197, miR-30a, miR-30d, miR-25), smoking status, fever, cough, chest pain or tightness, bloody phlegm, haemoptysis, were significantly different between lung cancer and control groups (P<0.05). The accuracies of the combined SVM, miRNAs SVM, symptom SVM, combined Fisher, miRNAs Fisher and symptom Fisher were 96.34%, 80.49%, 84.15%, 84.15%, 75.61%, and 80.49%, respectively; AUC of these six model were 0.976, 0.841, 0.838, 0.865, 0.750, and 0.801, respectively. The accuracy and AUC of combined SVM were higher than the other 5 models (P<0.05). Conclusions: Our findings indicate that SVM model based on plasma miRNAs biomarkers may serve as a novel, accurate, noninvasive method for auxiliary diagnosis of lung cancer. Ivyspring International Publisher 2019-08-28 /pmc/articles/PMC6775617/ /pubmed/31602261 http://dx.doi.org/10.7150/jca.30528 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Wang, Wei
Ding, Mingcui
Duan, Xiaoran
Feng, Xiaolei
Wang, Pengpeng
Jiang, Qingfeng
Cheng, Zhe
Zhang, Wenjuan
Yu, Songcheng
Yao, Wu
Cui, Liuxin
Wu, Yongjun
Feng, Feifei
Yang, Yongli
Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title_full Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title_fullStr Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title_full_unstemmed Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title_short Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
title_sort diagnostic value of plasma micrornas for lung cancer using support vector machine model
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775617/
https://www.ncbi.nlm.nih.gov/pubmed/31602261
http://dx.doi.org/10.7150/jca.30528
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