Cargando…
Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model
Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established base...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775617/ https://www.ncbi.nlm.nih.gov/pubmed/31602261 http://dx.doi.org/10.7150/jca.30528 |
_version_ | 1783456288072531968 |
---|---|
author | Wang, Wei Ding, Mingcui Duan, Xiaoran Feng, Xiaolei Wang, Pengpeng Jiang, Qingfeng Cheng, Zhe Zhang, Wenjuan Yu, Songcheng Yao, Wu Cui, Liuxin Wu, Yongjun Feng, Feifei Yang, Yongli |
author_facet | Wang, Wei Ding, Mingcui Duan, Xiaoran Feng, Xiaolei Wang, Pengpeng Jiang, Qingfeng Cheng, Zhe Zhang, Wenjuan Yu, Songcheng Yao, Wu Cui, Liuxin Wu, Yongjun Feng, Feifei Yang, Yongli |
author_sort | Wang, Wei |
collection | PubMed |
description | Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established based on plasma miRNAs biomarkers, clinical symptoms and epidemiology material. Methods: The expressions of plasma miRNA were examined with SYBR Green-based quantitative real-time PCR. Results: We identified that the expressions of 10 plasma miRNAs (miR-21, miR-20a, miR-210, miR-145, miR-126, miR-223, miR-197, miR-30a, miR-30d, miR-25), smoking status, fever, cough, chest pain or tightness, bloody phlegm, haemoptysis, were significantly different between lung cancer and control groups (P<0.05). The accuracies of the combined SVM, miRNAs SVM, symptom SVM, combined Fisher, miRNAs Fisher and symptom Fisher were 96.34%, 80.49%, 84.15%, 84.15%, 75.61%, and 80.49%, respectively; AUC of these six model were 0.976, 0.841, 0.838, 0.865, 0.750, and 0.801, respectively. The accuracy and AUC of combined SVM were higher than the other 5 models (P<0.05). Conclusions: Our findings indicate that SVM model based on plasma miRNAs biomarkers may serve as a novel, accurate, noninvasive method for auxiliary diagnosis of lung cancer. |
format | Online Article Text |
id | pubmed-6775617 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-67756172019-10-10 Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model Wang, Wei Ding, Mingcui Duan, Xiaoran Feng, Xiaolei Wang, Pengpeng Jiang, Qingfeng Cheng, Zhe Zhang, Wenjuan Yu, Songcheng Yao, Wu Cui, Liuxin Wu, Yongjun Feng, Feifei Yang, Yongli J Cancer Research Paper Aim: Small single-stranded non-coding RNAs (miRNAs) play an important role in carcinogenesis through degrading target mRNAs. However, the diagnostic value of miRNAs was not explored in lung cancers. In this study, a support-vector-machine (SVM) model for diagnosis of lung cancer was established based on plasma miRNAs biomarkers, clinical symptoms and epidemiology material. Methods: The expressions of plasma miRNA were examined with SYBR Green-based quantitative real-time PCR. Results: We identified that the expressions of 10 plasma miRNAs (miR-21, miR-20a, miR-210, miR-145, miR-126, miR-223, miR-197, miR-30a, miR-30d, miR-25), smoking status, fever, cough, chest pain or tightness, bloody phlegm, haemoptysis, were significantly different between lung cancer and control groups (P<0.05). The accuracies of the combined SVM, miRNAs SVM, symptom SVM, combined Fisher, miRNAs Fisher and symptom Fisher were 96.34%, 80.49%, 84.15%, 84.15%, 75.61%, and 80.49%, respectively; AUC of these six model were 0.976, 0.841, 0.838, 0.865, 0.750, and 0.801, respectively. The accuracy and AUC of combined SVM were higher than the other 5 models (P<0.05). Conclusions: Our findings indicate that SVM model based on plasma miRNAs biomarkers may serve as a novel, accurate, noninvasive method for auxiliary diagnosis of lung cancer. Ivyspring International Publisher 2019-08-28 /pmc/articles/PMC6775617/ /pubmed/31602261 http://dx.doi.org/10.7150/jca.30528 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Wang, Wei Ding, Mingcui Duan, Xiaoran Feng, Xiaolei Wang, Pengpeng Jiang, Qingfeng Cheng, Zhe Zhang, Wenjuan Yu, Songcheng Yao, Wu Cui, Liuxin Wu, Yongjun Feng, Feifei Yang, Yongli Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title | Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title_full | Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title_fullStr | Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title_full_unstemmed | Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title_short | Diagnostic Value of Plasma MicroRNAs for Lung Cancer Using Support Vector Machine Model |
title_sort | diagnostic value of plasma micrornas for lung cancer using support vector machine model |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775617/ https://www.ncbi.nlm.nih.gov/pubmed/31602261 http://dx.doi.org/10.7150/jca.30528 |
work_keys_str_mv | AT wangwei diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT dingmingcui diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT duanxiaoran diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT fengxiaolei diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT wangpengpeng diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT jiangqingfeng diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT chengzhe diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT zhangwenjuan diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT yusongcheng diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT yaowu diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT cuiliuxin diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT wuyongjun diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT fengfeifei diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel AT yangyongli diagnosticvalueofplasmamicrornasforlungcancerusingsupportvectormachinemodel |