Cargando…

Insights into ecological role of a new deltaproteobacterial order Candidatus Acidulodesulfobacterales by metagenomics and metatranscriptomics

Several abundant but yet uncultivated bacterial groups exist in extreme iron- and sulfur-rich environments, and the physiology, biodiversity, and ecological roles of these bacteria remain a mystery. Here we retrieved four metagenome-assembled genomes (MAGs) from an artificial acid mine drainage (AMD...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tan, Sha, Liu, Jun, Fang, Yun, Hedlund, Brian P., Lian, Zheng-Han, Huang, Li-Ying, Li, Jin-Tian, Huang, Li-Nan, Li, Wen-Jun, Jiang, Hong-Chen, Dong, Hai-Liang, Shu, Wen-Sheng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2019
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6776010/ https://www.ncbi.nlm.nih.gov/pubmed/30962514 http://dx.doi.org/10.1038/s41396-019-0415-y

Ejemplares similares

“Candidatus Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata
por: Jiang, Lijing, et al.
Publicado: (2020)

Ecological roles of dominant and rare prokaryotes in acid mine drainage revealed by metagenomics and metatranscriptomics
por: Hua, Zheng-Shuang, et al.
Publicado: (2015)

Genomic Insights of “Candidatus Nitrosocaldaceae” Based on Nine New Metagenome-Assembled Genomes, Including “Candidatus Nitrosothermus” Gen Nov. and Two New Species of “Candidatus Nitrosocaldus”
por: Luo, Zhen-Hao, et al.
Publicado: (2021)

Comparative metagenomic and metatranscriptomic analyses of microbial communities in acid mine drainage
por: Chen, Lin-xing, et al.
Publicado: (2015)

Insight into the ecology of vaginal bacteria through integrative analyses of metagenomic and metatranscriptomic data
por: France, Michael T., et al.
Publicado: (2022)

Metagenomic and metatranscriptomic insights into sulfate-reducing bacteria in a revegetated acidic mine wasteland
por: Li, Jin-tian, et al.
Publicado: (2022)

Metagenomic and Metatranscriptomic Insight Into Oral Biofilms in Periodontitis and Related Systemic Diseases
por: Huang, Yi, et al.
Publicado: (2021)

Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis
por: Oyserman, Ben O, et al.
Publicado: (2016)

Metatranscriptomics Supports the Mechanism for Biocathode Electroautotrophy by “Candidatus Tenderia electrophaga”
por: Eddie, Brian J., et al.
Publicado: (2017)

Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis
por: Aguiar-Pulido, Vanessa, et al.
Publicado: (2016)

Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
por: Rogers, Scott O., et al.
Publicado: (2013)

Genome-Resolved Metagenomics and Metatranscriptomics Reveal Insights into the Ecology and Metabolism of Anaerobic Microbial Communities in PCB-Contaminated Sediments
por: Dang, Hongyu, et al.
Publicado: (2023)

Comparative Genomics Reveals Thermal Adaptation and a High Metabolic Diversity in “Candidatus Bathyarchaeia”
por: Qi, Yan-Ling, et al.
Publicado: (2021)

Metagenomic Discovery of “Candidatus Parvarchaeales”-Related Lineages Sheds Light on Adaptation and Diversification from Neutral-Thermal to Acidic-Mesothermal Environments
por: Rao, Yang-Zhi, et al.
Publicado: (2023)

Species-level functional profiling of metagenomes and metatranscriptomes
por: Franzosa, Eric A., et al.
Publicado: (2018)

Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
por: Tláskal, Vojtěch, et al.
Publicado: (2021)

Amplicons, Metagenomes, and Metatranscriptomes from Sediment and Water
por: Newman, Madison R., et al.
Publicado: (2023)

Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene
por: DiDonato, Raymond J., et al.
Publicado: (2010)

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG
por: Mitra, Suparna, et al.
Publicado: (2011)

Metagenome and Metatranscriptome Analyses Using Protein Family Profiles
por: Zhong, Cuncong, et al.
Publicado: (2016)

Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
por: Chuckran, Peter F., et al.
Publicado: (2020)

Effects of Candidatus Liberibacter asiaticus infection on metagenome of Diaphorina citri gut endosymbiont
por: Pan, Qi, et al.
Publicado: (2023)

Deciphering Symbiotic Interactions of “Candidatus Aenigmarchaeota” with Inferred Horizontal Gene Transfers and Co-occurrence Networks
por: Li, Yu-Xian, et al.
Publicado: (2021)

Exploring the Change of Host and Microorganism in Chronic Obstructive Pulmonary Disease Patients Based on Metagenomic and Metatranscriptomic Sequencing
por: Yang, Jing, et al.
Publicado: (2022)

Oceanic Crustal Fluid Single Cell Genomics Complements Metagenomic and Metatranscriptomic Surveys With Orders of Magnitude Less Sample Volume
por: D’Angelo, Timothy, et al.
Publicado: (2022)

Metagenomes, Metagenome-Assembled Genomes, and Metatranscriptomes from Polychlorinated Biphenyl-Contaminated Sediment Microcosms
por: Ewald, Jessica M., et al.
Publicado: (2022)

Metagenomic and metatranscriptomic inventories of the lower Amazon River, May 2011
por: Satinsky, Brandon M., et al.
Publicado: (2015)

Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysis
por: Ye, Yuzhen, et al.
Publicado: (2016)

Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria
por: Martínez, Asunción, et al.
Publicado: (2013)

FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies
por: Kim, Jiwoong, et al.
Publicado: (2016)

Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom
por: Nowinski, Brent, et al.
Publicado: (2019)

Comparative Microbiome Study of Mummified Peach Fruits by Metagenomics and Metatranscriptomics
por: Jo, Yeonhwa, et al.
Publicado: (2020)

Relating the gut metagenome and metatranscriptome to immunotherapy responses in melanoma patients
por: Peters, Brandilyn A., et al.
Publicado: (2019)

Metagenomic and metatranscriptomic profiling of Lactobacillus casei Zhang in the human gut
por: Wang, Jicheng, et al.
Publicado: (2021)

Integrated Metagenomics and Metatranscriptomics Analyses of Root-Associated Soil from Transgenic Switchgrass
por: Chauhan, Archana, et al.
Publicado: (2014)

Metagenomes, Metatranscriptomes, and Metagenome-Assembled Genomes from Chesapeake and Delaware Bay (USA) Water Samples
por: Ahmed, Mir Alvee, et al.
Publicado: (2021)

Identification of natural antimicrobial peptides from bacteria through metagenomic and metatranscriptomic analysis of high-throughput transcriptome data of Taiwanese oolong teas
por: Huang, Kai-Yao, et al.
Publicado: (2017)

Metagenomic and Metatranscriptomic Study of Microbial Metal Resistance in an Acidic Pit Lake
por: Ayala-Muñoz, Diana, et al.
Publicado: (2020)

Metatranscriptomic and Metagenomic Analysis of Biological Diversity in Subglacial Lake Vostok (Antarctica)
por: Gura, Colby, et al.
Publicado: (2020)

Metatranscriptomic Analysis of Human Lung Metagenomes from Patients with Lung Cancer
por: Chang, Ya-Sian, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_n1idaolu05sr5s3fnikil0clvt