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Whale counting in satellite and aerial images with deep learning

Despite their interest and threat status, the number of whales in world’s oceans remains highly uncertain. Whales detection is normally carried out from costly sighting surveys, acoustic surveys or through high-resolution images. Since deep convolutional neural networks (CNNs) are achieving great pe...

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Autores principales: Guirado, Emilio, Tabik, Siham, Rivas, Marga L., Alcaraz-Segura, Domingo, Herrera, Francisco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6776647/
https://www.ncbi.nlm.nih.gov/pubmed/31582780
http://dx.doi.org/10.1038/s41598-019-50795-9
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author Guirado, Emilio
Tabik, Siham
Rivas, Marga L.
Alcaraz-Segura, Domingo
Herrera, Francisco
author_facet Guirado, Emilio
Tabik, Siham
Rivas, Marga L.
Alcaraz-Segura, Domingo
Herrera, Francisco
author_sort Guirado, Emilio
collection PubMed
description Despite their interest and threat status, the number of whales in world’s oceans remains highly uncertain. Whales detection is normally carried out from costly sighting surveys, acoustic surveys or through high-resolution images. Since deep convolutional neural networks (CNNs) are achieving great performance in several computer vision tasks, here we propose a robust and generalizable CNN-based system for automatically detecting and counting whales in satellite and aerial images based on open data and tools. In particular, we designed a two-step whale counting approach, where the first CNN finds the input images with whale presence, and the second CNN locates and counts each whale in those images. A test of the system on Google Earth images in ten global whale-watching hotspots achieved a performance (F1-measure) of 81% in detecting and 94% in counting whales. Combining these two steps increased accuracy by 36% compared to a baseline detection model alone. Applying this cost-effective method worldwide could contribute to the assessment of whale populations to guide conservation actions. Free and global access to high-resolution imagery for conservation purposes would boost this process.
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spelling pubmed-67766472019-10-09 Whale counting in satellite and aerial images with deep learning Guirado, Emilio Tabik, Siham Rivas, Marga L. Alcaraz-Segura, Domingo Herrera, Francisco Sci Rep Article Despite their interest and threat status, the number of whales in world’s oceans remains highly uncertain. Whales detection is normally carried out from costly sighting surveys, acoustic surveys or through high-resolution images. Since deep convolutional neural networks (CNNs) are achieving great performance in several computer vision tasks, here we propose a robust and generalizable CNN-based system for automatically detecting and counting whales in satellite and aerial images based on open data and tools. In particular, we designed a two-step whale counting approach, where the first CNN finds the input images with whale presence, and the second CNN locates and counts each whale in those images. A test of the system on Google Earth images in ten global whale-watching hotspots achieved a performance (F1-measure) of 81% in detecting and 94% in counting whales. Combining these two steps increased accuracy by 36% compared to a baseline detection model alone. Applying this cost-effective method worldwide could contribute to the assessment of whale populations to guide conservation actions. Free and global access to high-resolution imagery for conservation purposes would boost this process. Nature Publishing Group UK 2019-10-03 /pmc/articles/PMC6776647/ /pubmed/31582780 http://dx.doi.org/10.1038/s41598-019-50795-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Guirado, Emilio
Tabik, Siham
Rivas, Marga L.
Alcaraz-Segura, Domingo
Herrera, Francisco
Whale counting in satellite and aerial images with deep learning
title Whale counting in satellite and aerial images with deep learning
title_full Whale counting in satellite and aerial images with deep learning
title_fullStr Whale counting in satellite and aerial images with deep learning
title_full_unstemmed Whale counting in satellite and aerial images with deep learning
title_short Whale counting in satellite and aerial images with deep learning
title_sort whale counting in satellite and aerial images with deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6776647/
https://www.ncbi.nlm.nih.gov/pubmed/31582780
http://dx.doi.org/10.1038/s41598-019-50795-9
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