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Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives

Animals that lived at high altitudes have evolved distinctive physiological traits that allow them to tolerate extreme high-altitude environment, including higher hemoglobin concentration, increased oxygen saturation of blood and a high energy metabolism. Although previous investigations performed p...

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Autores principales: Long, Keren, Feng, Siyuan, Ma, Jideng, Zhang, Jinwei, Jin, Long, Tang, Qianzi, Wang, Xun, Mai, Miaomiao, Xiao, Weihang, Liu, Lingyan, Li, Xuewei, Li, Mingzhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6778140/
https://www.ncbi.nlm.nih.gov/pubmed/31586122
http://dx.doi.org/10.1038/s41597-019-0204-5
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author Long, Keren
Feng, Siyuan
Ma, Jideng
Zhang, Jinwei
Jin, Long
Tang, Qianzi
Wang, Xun
Mai, Miaomiao
Xiao, Weihang
Liu, Lingyan
Li, Xuewei
Li, Mingzhou
author_facet Long, Keren
Feng, Siyuan
Ma, Jideng
Zhang, Jinwei
Jin, Long
Tang, Qianzi
Wang, Xun
Mai, Miaomiao
Xiao, Weihang
Liu, Lingyan
Li, Xuewei
Li, Mingzhou
author_sort Long, Keren
collection PubMed
description Animals that lived at high altitudes have evolved distinctive physiological traits that allow them to tolerate extreme high-altitude environment, including higher hemoglobin concentration, increased oxygen saturation of blood and a high energy metabolism. Although previous investigations performed plenty of comparison between high- and low-altitude mammals at the level of morphology, physiology and genomics, mechanism underlying high-altitude adaptation remains largely unknown. Few studies provided comparative analyses in high-altitude adaptation, such as parallel analysis in multiple species. In this study, we generated high-quality small RNA sequencing data for six tissues (heart, liver, spleen, lung, kidney and muscle) from low- and high-altitude populations of four typical livestock animals, and identified comparable numbers of miRNAs in each species. This dataset will provide valuable information for understanding the molecular mechanism of high-altitude adaptation in vertebrates.
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spelling pubmed-67781402019-10-10 Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives Long, Keren Feng, Siyuan Ma, Jideng Zhang, Jinwei Jin, Long Tang, Qianzi Wang, Xun Mai, Miaomiao Xiao, Weihang Liu, Lingyan Li, Xuewei Li, Mingzhou Sci Data Data Descriptor Animals that lived at high altitudes have evolved distinctive physiological traits that allow them to tolerate extreme high-altitude environment, including higher hemoglobin concentration, increased oxygen saturation of blood and a high energy metabolism. Although previous investigations performed plenty of comparison between high- and low-altitude mammals at the level of morphology, physiology and genomics, mechanism underlying high-altitude adaptation remains largely unknown. Few studies provided comparative analyses in high-altitude adaptation, such as parallel analysis in multiple species. In this study, we generated high-quality small RNA sequencing data for six tissues (heart, liver, spleen, lung, kidney and muscle) from low- and high-altitude populations of four typical livestock animals, and identified comparable numbers of miRNAs in each species. This dataset will provide valuable information for understanding the molecular mechanism of high-altitude adaptation in vertebrates. Nature Publishing Group UK 2019-10-04 /pmc/articles/PMC6778140/ /pubmed/31586122 http://dx.doi.org/10.1038/s41597-019-0204-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Long, Keren
Feng, Siyuan
Ma, Jideng
Zhang, Jinwei
Jin, Long
Tang, Qianzi
Wang, Xun
Mai, Miaomiao
Xiao, Weihang
Liu, Lingyan
Li, Xuewei
Li, Mingzhou
Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title_full Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title_fullStr Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title_full_unstemmed Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title_short Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives
title_sort small non-coding rna transcriptome of four high-altitude vertebrates and their low-altitude relatives
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6778140/
https://www.ncbi.nlm.nih.gov/pubmed/31586122
http://dx.doi.org/10.1038/s41597-019-0204-5
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