Cargando…
High-resolution limited-angle phase tomography of dense layered objects using deep neural networks
We present a machine learning-based method for tomographic reconstruction of dense layered objects, with range of projection angles limited to [Formula: see text]. Whereas previous approaches to phase tomography generally require 2 steps, first to retrieve phase projections from intensity projection...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6778227/ https://www.ncbi.nlm.nih.gov/pubmed/31527279 http://dx.doi.org/10.1073/pnas.1821378116 |
_version_ | 1783456733160538112 |
---|---|
author | Goy, Alexandre Rughoobur, Girish Li, Shuai Arthur, Kwabena Akinwande, Akintunde I. Barbastathis, George |
author_facet | Goy, Alexandre Rughoobur, Girish Li, Shuai Arthur, Kwabena Akinwande, Akintunde I. Barbastathis, George |
author_sort | Goy, Alexandre |
collection | PubMed |
description | We present a machine learning-based method for tomographic reconstruction of dense layered objects, with range of projection angles limited to [Formula: see text]. Whereas previous approaches to phase tomography generally require 2 steps, first to retrieve phase projections from intensity projections and then to perform tomographic reconstruction on the retrieved phase projections, in our work a physics-informed preprocessor followed by a deep neural network (DNN) conduct the 3-dimensional reconstruction directly from the intensity projections. We demonstrate this single-step method experimentally in the visible optical domain on a scaled-up integrated circuit phantom. We show that even under conditions of highly attenuated photon fluxes a DNN trained only on synthetic data can be used to successfully reconstruct physical samples disjoint from the synthetic training set. Thus, the need for producing a large number of physical examples for training is ameliorated. The method is generally applicable to tomography with electromagnetic or other types of radiation at all bands. |
format | Online Article Text |
id | pubmed-6778227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-67782272019-10-09 High-resolution limited-angle phase tomography of dense layered objects using deep neural networks Goy, Alexandre Rughoobur, Girish Li, Shuai Arthur, Kwabena Akinwande, Akintunde I. Barbastathis, George Proc Natl Acad Sci U S A PNAS Plus We present a machine learning-based method for tomographic reconstruction of dense layered objects, with range of projection angles limited to [Formula: see text]. Whereas previous approaches to phase tomography generally require 2 steps, first to retrieve phase projections from intensity projections and then to perform tomographic reconstruction on the retrieved phase projections, in our work a physics-informed preprocessor followed by a deep neural network (DNN) conduct the 3-dimensional reconstruction directly from the intensity projections. We demonstrate this single-step method experimentally in the visible optical domain on a scaled-up integrated circuit phantom. We show that even under conditions of highly attenuated photon fluxes a DNN trained only on synthetic data can be used to successfully reconstruct physical samples disjoint from the synthetic training set. Thus, the need for producing a large number of physical examples for training is ameliorated. The method is generally applicable to tomography with electromagnetic or other types of radiation at all bands. National Academy of Sciences 2019-10-01 2019-09-16 /pmc/articles/PMC6778227/ /pubmed/31527279 http://dx.doi.org/10.1073/pnas.1821378116 Text en Copyright © 2019 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | PNAS Plus Goy, Alexandre Rughoobur, Girish Li, Shuai Arthur, Kwabena Akinwande, Akintunde I. Barbastathis, George High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title | High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title_full | High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title_fullStr | High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title_full_unstemmed | High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title_short | High-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
title_sort | high-resolution limited-angle phase tomography of dense layered objects using deep neural networks |
topic | PNAS Plus |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6778227/ https://www.ncbi.nlm.nih.gov/pubmed/31527279 http://dx.doi.org/10.1073/pnas.1821378116 |
work_keys_str_mv | AT goyalexandre highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks AT rughooburgirish highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks AT lishuai highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks AT arthurkwabena highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks AT akinwandeakintundei highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks AT barbastathisgeorge highresolutionlimitedanglephasetomographyofdenselayeredobjectsusingdeepneuralnetworks |