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Artificial intelligence reveals environmental constraints on colour diversity in insects

Explaining colour variation among animals at broad geographic scales remains challenging. Here we demonstrate how deep learning—a form of artificial intelligence—can reveal subtle but robust patterns of colour feature variation along an ecological gradient, as well as help identify the underlying me...

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Autores principales: Wu, Shipher, Chang, Chun-Min, Mai, Guan-Shuo, Rubenstein, Dustin R., Yang, Chen-Ming, Huang, Yu-Ting, Lin, Hsu-Hong, Shih, Li-Cheng, Chen, Sheng-Wei, Shen, Sheng-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779759/
https://www.ncbi.nlm.nih.gov/pubmed/31591404
http://dx.doi.org/10.1038/s41467-019-12500-2
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author Wu, Shipher
Chang, Chun-Min
Mai, Guan-Shuo
Rubenstein, Dustin R.
Yang, Chen-Ming
Huang, Yu-Ting
Lin, Hsu-Hong
Shih, Li-Cheng
Chen, Sheng-Wei
Shen, Sheng-Feng
author_facet Wu, Shipher
Chang, Chun-Min
Mai, Guan-Shuo
Rubenstein, Dustin R.
Yang, Chen-Ming
Huang, Yu-Ting
Lin, Hsu-Hong
Shih, Li-Cheng
Chen, Sheng-Wei
Shen, Sheng-Feng
author_sort Wu, Shipher
collection PubMed
description Explaining colour variation among animals at broad geographic scales remains challenging. Here we demonstrate how deep learning—a form of artificial intelligence—can reveal subtle but robust patterns of colour feature variation along an ecological gradient, as well as help identify the underlying mechanisms generating this biogeographic pattern. Using over 20,000 images with precise GPS locality information belonging to nearly 2,000 moth species from Taiwan, our deep learning model generates a 2048-dimension feature vector that accurately predicts each species’ mean elevation based on colour and shape features. Using this multidimensional feature vector, we find that within-assemblage image feature variation is smaller in high elevation assemblages. Structural equation modeling suggests that this reduced image feature diversity is likely the result of colder environments selecting for darker colouration, which limits the colour diversity of assemblages at high elevations. Ultimately, with the help of deep learning, we will be able to explore the endless forms of natural morphological variation at unpreceded depths.
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spelling pubmed-67797592019-10-09 Artificial intelligence reveals environmental constraints on colour diversity in insects Wu, Shipher Chang, Chun-Min Mai, Guan-Shuo Rubenstein, Dustin R. Yang, Chen-Ming Huang, Yu-Ting Lin, Hsu-Hong Shih, Li-Cheng Chen, Sheng-Wei Shen, Sheng-Feng Nat Commun Article Explaining colour variation among animals at broad geographic scales remains challenging. Here we demonstrate how deep learning—a form of artificial intelligence—can reveal subtle but robust patterns of colour feature variation along an ecological gradient, as well as help identify the underlying mechanisms generating this biogeographic pattern. Using over 20,000 images with precise GPS locality information belonging to nearly 2,000 moth species from Taiwan, our deep learning model generates a 2048-dimension feature vector that accurately predicts each species’ mean elevation based on colour and shape features. Using this multidimensional feature vector, we find that within-assemblage image feature variation is smaller in high elevation assemblages. Structural equation modeling suggests that this reduced image feature diversity is likely the result of colder environments selecting for darker colouration, which limits the colour diversity of assemblages at high elevations. Ultimately, with the help of deep learning, we will be able to explore the endless forms of natural morphological variation at unpreceded depths. Nature Publishing Group UK 2019-10-07 /pmc/articles/PMC6779759/ /pubmed/31591404 http://dx.doi.org/10.1038/s41467-019-12500-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wu, Shipher
Chang, Chun-Min
Mai, Guan-Shuo
Rubenstein, Dustin R.
Yang, Chen-Ming
Huang, Yu-Ting
Lin, Hsu-Hong
Shih, Li-Cheng
Chen, Sheng-Wei
Shen, Sheng-Feng
Artificial intelligence reveals environmental constraints on colour diversity in insects
title Artificial intelligence reveals environmental constraints on colour diversity in insects
title_full Artificial intelligence reveals environmental constraints on colour diversity in insects
title_fullStr Artificial intelligence reveals environmental constraints on colour diversity in insects
title_full_unstemmed Artificial intelligence reveals environmental constraints on colour diversity in insects
title_short Artificial intelligence reveals environmental constraints on colour diversity in insects
title_sort artificial intelligence reveals environmental constraints on colour diversity in insects
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779759/
https://www.ncbi.nlm.nih.gov/pubmed/31591404
http://dx.doi.org/10.1038/s41467-019-12500-2
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