Cargando…
Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779878/ https://www.ncbi.nlm.nih.gov/pubmed/31591475 http://dx.doi.org/10.1038/s41598-019-50798-6 |
_version_ | 1783456993799831552 |
---|---|
author | Cha, Do Hyeon Gee, Heon Yung Cachau, Raul Choi, Jong Mun Park, Daeui Jee, Sun Ha Ryu, Seungho Kim, Kyeong Kyu Won, Hong-Hee Limou, Sophie Myung, Woojae Winkler, Cheryl A. Cho, Sung Kweon |
author_facet | Cha, Do Hyeon Gee, Heon Yung Cachau, Raul Choi, Jong Mun Park, Daeui Jee, Sun Ha Ryu, Seungho Kim, Kyeong Kyu Won, Hong-Hee Limou, Sophie Myung, Woojae Winkler, Cheryl A. Cho, Sung Kweon |
author_sort | Cha, Do Hyeon |
collection | PubMed |
description | Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary screening. We selected all cases (N = 31) with extreme hypouricemia (<1.3 mg/dl) from a Korean urban cohort of 179,381 subjects without underlying conditions. WES and corresponding downstream analyses were performed for the discovery of rare causal variants for hypouricemia. Two known recessive variants within SLC22A12 (p.Trp258*, pArg90His) were identified in 24 out of 31 subjects (77.4%). In an independent cohort, we identified 50 individuals with hypouricemia and genotyped the p.Trp258* and p.Arg90His variants; 47 of the 50 (94%) hypouricemia cases were explained by only two mutations. Four novel coding variants in SLC22A12, p.Asn136Lys, p.Thr225Lys, p.Arg284Gln, and p.Glu429Lys, were additionally identified. In silico studies predict these as pathogenic variants. This is the first study to show the value of genetic diagnostic screening for hypouricemia in the clinical setting. Screening of just two ethnic-specific variants (p.Trp258* and p.Arg90His) identified 87.7% (71/81) of Korean patients with monogenic hypouricemia. Early genetic identification of constitutive hypouricemia may prevent acute kidney injury by avoidance of dehydration and excessive exercise. |
format | Online Article Text |
id | pubmed-6779878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67798782019-10-16 Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes Cha, Do Hyeon Gee, Heon Yung Cachau, Raul Choi, Jong Mun Park, Daeui Jee, Sun Ha Ryu, Seungho Kim, Kyeong Kyu Won, Hong-Hee Limou, Sophie Myung, Woojae Winkler, Cheryl A. Cho, Sung Kweon Sci Rep Article Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary screening. We selected all cases (N = 31) with extreme hypouricemia (<1.3 mg/dl) from a Korean urban cohort of 179,381 subjects without underlying conditions. WES and corresponding downstream analyses were performed for the discovery of rare causal variants for hypouricemia. Two known recessive variants within SLC22A12 (p.Trp258*, pArg90His) were identified in 24 out of 31 subjects (77.4%). In an independent cohort, we identified 50 individuals with hypouricemia and genotyped the p.Trp258* and p.Arg90His variants; 47 of the 50 (94%) hypouricemia cases were explained by only two mutations. Four novel coding variants in SLC22A12, p.Asn136Lys, p.Thr225Lys, p.Arg284Gln, and p.Glu429Lys, were additionally identified. In silico studies predict these as pathogenic variants. This is the first study to show the value of genetic diagnostic screening for hypouricemia in the clinical setting. Screening of just two ethnic-specific variants (p.Trp258* and p.Arg90His) identified 87.7% (71/81) of Korean patients with monogenic hypouricemia. Early genetic identification of constitutive hypouricemia may prevent acute kidney injury by avoidance of dehydration and excessive exercise. Nature Publishing Group UK 2019-10-07 /pmc/articles/PMC6779878/ /pubmed/31591475 http://dx.doi.org/10.1038/s41598-019-50798-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Cha, Do Hyeon Gee, Heon Yung Cachau, Raul Choi, Jong Mun Park, Daeui Jee, Sun Ha Ryu, Seungho Kim, Kyeong Kyu Won, Hong-Hee Limou, Sophie Myung, Woojae Winkler, Cheryl A. Cho, Sung Kweon Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title | Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title_full | Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title_fullStr | Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title_full_unstemmed | Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title_short | Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes |
title_sort | contribution of slc22a12 on hypouricemia and its clinical significance for screening purposes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779878/ https://www.ncbi.nlm.nih.gov/pubmed/31591475 http://dx.doi.org/10.1038/s41598-019-50798-6 |
work_keys_str_mv | AT chadohyeon contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT geeheonyung contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT cachauraul contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT choijongmun contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT parkdaeui contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT jeesunha contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT ryuseungho contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT kimkyeongkyu contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT wonhonghee contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT limousophie contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT myungwoojae contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT winklercheryla contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes AT chosungkweon contributionofslc22a12onhypouricemiaanditsclinicalsignificanceforscreeningpurposes |