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Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes

Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary...

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Autores principales: Cha, Do Hyeon, Gee, Heon Yung, Cachau, Raul, Choi, Jong Mun, Park, Daeui, Jee, Sun Ha, Ryu, Seungho, Kim, Kyeong Kyu, Won, Hong-Hee, Limou, Sophie, Myung, Woojae, Winkler, Cheryl A., Cho, Sung Kweon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779878/
https://www.ncbi.nlm.nih.gov/pubmed/31591475
http://dx.doi.org/10.1038/s41598-019-50798-6
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author Cha, Do Hyeon
Gee, Heon Yung
Cachau, Raul
Choi, Jong Mun
Park, Daeui
Jee, Sun Ha
Ryu, Seungho
Kim, Kyeong Kyu
Won, Hong-Hee
Limou, Sophie
Myung, Woojae
Winkler, Cheryl A.
Cho, Sung Kweon
author_facet Cha, Do Hyeon
Gee, Heon Yung
Cachau, Raul
Choi, Jong Mun
Park, Daeui
Jee, Sun Ha
Ryu, Seungho
Kim, Kyeong Kyu
Won, Hong-Hee
Limou, Sophie
Myung, Woojae
Winkler, Cheryl A.
Cho, Sung Kweon
author_sort Cha, Do Hyeon
collection PubMed
description Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary screening. We selected all cases (N = 31) with extreme hypouricemia (<1.3 mg/dl) from a Korean urban cohort of 179,381 subjects without underlying conditions. WES and corresponding downstream analyses were performed for the discovery of rare causal variants for hypouricemia. Two known recessive variants within SLC22A12 (p.Trp258*, pArg90His) were identified in 24 out of 31 subjects (77.4%). In an independent cohort, we identified 50 individuals with hypouricemia and genotyped the p.Trp258* and p.Arg90His variants; 47 of the 50 (94%) hypouricemia cases were explained by only two mutations. Four novel coding variants in SLC22A12, p.Asn136Lys, p.Thr225Lys, p.Arg284Gln, and p.Glu429Lys, were additionally identified. In silico studies predict these as pathogenic variants. This is the first study to show the value of genetic diagnostic screening for hypouricemia in the clinical setting. Screening of just two ethnic-specific variants (p.Trp258* and p.Arg90His) identified 87.7% (71/81) of Korean patients with monogenic hypouricemia. Early genetic identification of constitutive hypouricemia may prevent acute kidney injury by avoidance of dehydration and excessive exercise.
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spelling pubmed-67798782019-10-16 Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes Cha, Do Hyeon Gee, Heon Yung Cachau, Raul Choi, Jong Mun Park, Daeui Jee, Sun Ha Ryu, Seungho Kim, Kyeong Kyu Won, Hong-Hee Limou, Sophie Myung, Woojae Winkler, Cheryl A. Cho, Sung Kweon Sci Rep Article Differentiating between inherited renal hypouricemia and transient hypouricemic status is challenging. Here, we aimed to describe the genetic background of hypouricemia patients using whole-exome sequencing (WES) and assess the feasibility for genetic diagnosis using two founder variants in primary screening. We selected all cases (N = 31) with extreme hypouricemia (<1.3 mg/dl) from a Korean urban cohort of 179,381 subjects without underlying conditions. WES and corresponding downstream analyses were performed for the discovery of rare causal variants for hypouricemia. Two known recessive variants within SLC22A12 (p.Trp258*, pArg90His) were identified in 24 out of 31 subjects (77.4%). In an independent cohort, we identified 50 individuals with hypouricemia and genotyped the p.Trp258* and p.Arg90His variants; 47 of the 50 (94%) hypouricemia cases were explained by only two mutations. Four novel coding variants in SLC22A12, p.Asn136Lys, p.Thr225Lys, p.Arg284Gln, and p.Glu429Lys, were additionally identified. In silico studies predict these as pathogenic variants. This is the first study to show the value of genetic diagnostic screening for hypouricemia in the clinical setting. Screening of just two ethnic-specific variants (p.Trp258* and p.Arg90His) identified 87.7% (71/81) of Korean patients with monogenic hypouricemia. Early genetic identification of constitutive hypouricemia may prevent acute kidney injury by avoidance of dehydration and excessive exercise. Nature Publishing Group UK 2019-10-07 /pmc/articles/PMC6779878/ /pubmed/31591475 http://dx.doi.org/10.1038/s41598-019-50798-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Cha, Do Hyeon
Gee, Heon Yung
Cachau, Raul
Choi, Jong Mun
Park, Daeui
Jee, Sun Ha
Ryu, Seungho
Kim, Kyeong Kyu
Won, Hong-Hee
Limou, Sophie
Myung, Woojae
Winkler, Cheryl A.
Cho, Sung Kweon
Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title_full Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title_fullStr Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title_full_unstemmed Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title_short Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
title_sort contribution of slc22a12 on hypouricemia and its clinical significance for screening purposes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6779878/
https://www.ncbi.nlm.nih.gov/pubmed/31591475
http://dx.doi.org/10.1038/s41598-019-50798-6
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