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Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection
Raman spectroscopy (RS) is widely used as a non-invasive technique in screening for the diagnosis of oral cancer. The potential of this optical technique for several biomedical applications has been proved. This work studies the efficacy of RS in detecting oral cancer using sub-site-wise differentia...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6780219/ https://www.ncbi.nlm.nih.gov/pubmed/31461884 http://dx.doi.org/10.3390/jcm8091313 |
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author | Jeng, Ming-Jer Sharma, Mukta Sharma, Lokesh Chao, Ting-Yu Huang, Shiang-Fu Chang, Liann-Be Wu, Shih-Lin Chow, Lee |
author_facet | Jeng, Ming-Jer Sharma, Mukta Sharma, Lokesh Chao, Ting-Yu Huang, Shiang-Fu Chang, Liann-Be Wu, Shih-Lin Chow, Lee |
author_sort | Jeng, Ming-Jer |
collection | PubMed |
description | Raman spectroscopy (RS) is widely used as a non-invasive technique in screening for the diagnosis of oral cancer. The potential of this optical technique for several biomedical applications has been proved. This work studies the efficacy of RS in detecting oral cancer using sub-site-wise differentiation. A total of 80 samples (44 tumor and 36 normal) were cryopreserved from three different sub-sites: The tongue, the buccal mucosa, and the gingiva of the oral mucosa during surgery. Linear discriminant analysis (LDA) and quadratic discriminant analysis (QDA) were used with principal component analysis (PCA) to classify the samples and the classifications were validated by leave-one-out-cross-validation (LOOCV) and k-fold cross-validation methods. The normal and tumor tissues were differentiated under the PCA-LDA model with an accuracy of 81.25% (sensitivity: 77.27%, specificity: 86.11%). The PCA-QDA classifier model differentiated these tissues with an accuracy of 87.5% (sensitivity: 90.90%, specificity: 83.33%). The PCA-QDA classifier model outperformed the PCA-LDA-based classifier. The model studies revealed that protein, amino acid, and beta-carotene variations are the main biomolecular difference markers for detecting oral cancer. |
format | Online Article Text |
id | pubmed-6780219 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67802192019-10-30 Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection Jeng, Ming-Jer Sharma, Mukta Sharma, Lokesh Chao, Ting-Yu Huang, Shiang-Fu Chang, Liann-Be Wu, Shih-Lin Chow, Lee J Clin Med Article Raman spectroscopy (RS) is widely used as a non-invasive technique in screening for the diagnosis of oral cancer. The potential of this optical technique for several biomedical applications has been proved. This work studies the efficacy of RS in detecting oral cancer using sub-site-wise differentiation. A total of 80 samples (44 tumor and 36 normal) were cryopreserved from three different sub-sites: The tongue, the buccal mucosa, and the gingiva of the oral mucosa during surgery. Linear discriminant analysis (LDA) and quadratic discriminant analysis (QDA) were used with principal component analysis (PCA) to classify the samples and the classifications were validated by leave-one-out-cross-validation (LOOCV) and k-fold cross-validation methods. The normal and tumor tissues were differentiated under the PCA-LDA model with an accuracy of 81.25% (sensitivity: 77.27%, specificity: 86.11%). The PCA-QDA classifier model differentiated these tissues with an accuracy of 87.5% (sensitivity: 90.90%, specificity: 83.33%). The PCA-QDA classifier model outperformed the PCA-LDA-based classifier. The model studies revealed that protein, amino acid, and beta-carotene variations are the main biomolecular difference markers for detecting oral cancer. MDPI 2019-08-27 /pmc/articles/PMC6780219/ /pubmed/31461884 http://dx.doi.org/10.3390/jcm8091313 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jeng, Ming-Jer Sharma, Mukta Sharma, Lokesh Chao, Ting-Yu Huang, Shiang-Fu Chang, Liann-Be Wu, Shih-Lin Chow, Lee Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title | Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title_full | Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title_fullStr | Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title_full_unstemmed | Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title_short | Raman Spectroscopy Analysis for Optical Diagnosis of Oral Cancer Detection |
title_sort | raman spectroscopy analysis for optical diagnosis of oral cancer detection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6780219/ https://www.ncbi.nlm.nih.gov/pubmed/31461884 http://dx.doi.org/10.3390/jcm8091313 |
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