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A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival
Autophagy has an important role in the pathogenesis of plasma cell development and multiple myeloma (MM); however, the prognostic role of autophagy-related genes (ARGs) in MM remains undefined. In the present study, the expression profiles of 234 ARGs were obtained from a Gene Expression Omnibus dat...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6781562/ https://www.ncbi.nlm.nih.gov/pubmed/31612041 http://dx.doi.org/10.3892/ol.2019.10881 |
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author | Zhu, Fang-Xiao Wang, Xiao-Tao Zeng, Hui-Qiong Yin, Zhi-Hua Ye, Zhi-Zhong |
author_facet | Zhu, Fang-Xiao Wang, Xiao-Tao Zeng, Hui-Qiong Yin, Zhi-Hua Ye, Zhi-Zhong |
author_sort | Zhu, Fang-Xiao |
collection | PubMed |
description | Autophagy has an important role in the pathogenesis of plasma cell development and multiple myeloma (MM); however, the prognostic role of autophagy-related genes (ARGs) in MM remains undefined. In the present study, the expression profiles of 234 ARGs were obtained from a Gene Expression Omnibus dataset (accession GSE24080), which contains 559 samples of patients with MM analyzed with 54,675 probes. Univariate Cox regression analysis identified 55 ARGs that were significantly associated with event-free survival of MM. Furthermore, a risk score with 16 survival-associated ARGs was developed using multivariate Cox regression analysis, including ATIC, BNIP3L, CALCOCO2, DNAJB1, DNAJB9, EIF4EBP1, EVA1A, FKBP1B, FOXO1, FOXO3, GABARAP, HIF1A, NCKAP1, PRKAR1A and SUPT20H, was constructed. Using this prognostic signature, patients with MM could be separated into high- and low-risk groups with distinct clinical outcomes. The area under the curve values for the receiver operating characteristic curves were 0.740, 0.741 and 0.712 for 3, 5 and 10 years prognosis predictions, respectively. Notably, the prognostic role of this risk score could be validated with another four independent cohorts (accessions: GSE57317, GSE4581, GSE4452 and GSE4204). In conclusion, ARGs may serve vital roles in the progression of MM, and the ARGs-based prognostic model may provide novel ideas for clinical applications in MM. |
format | Online Article Text |
id | pubmed-6781562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-67815622019-10-14 A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival Zhu, Fang-Xiao Wang, Xiao-Tao Zeng, Hui-Qiong Yin, Zhi-Hua Ye, Zhi-Zhong Oncol Lett Articles Autophagy has an important role in the pathogenesis of plasma cell development and multiple myeloma (MM); however, the prognostic role of autophagy-related genes (ARGs) in MM remains undefined. In the present study, the expression profiles of 234 ARGs were obtained from a Gene Expression Omnibus dataset (accession GSE24080), which contains 559 samples of patients with MM analyzed with 54,675 probes. Univariate Cox regression analysis identified 55 ARGs that were significantly associated with event-free survival of MM. Furthermore, a risk score with 16 survival-associated ARGs was developed using multivariate Cox regression analysis, including ATIC, BNIP3L, CALCOCO2, DNAJB1, DNAJB9, EIF4EBP1, EVA1A, FKBP1B, FOXO1, FOXO3, GABARAP, HIF1A, NCKAP1, PRKAR1A and SUPT20H, was constructed. Using this prognostic signature, patients with MM could be separated into high- and low-risk groups with distinct clinical outcomes. The area under the curve values for the receiver operating characteristic curves were 0.740, 0.741 and 0.712 for 3, 5 and 10 years prognosis predictions, respectively. Notably, the prognostic role of this risk score could be validated with another four independent cohorts (accessions: GSE57317, GSE4581, GSE4452 and GSE4204). In conclusion, ARGs may serve vital roles in the progression of MM, and the ARGs-based prognostic model may provide novel ideas for clinical applications in MM. D.A. Spandidos 2019-11 2019-09-19 /pmc/articles/PMC6781562/ /pubmed/31612041 http://dx.doi.org/10.3892/ol.2019.10881 Text en Copyright: © Zhu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhu, Fang-Xiao Wang, Xiao-Tao Zeng, Hui-Qiong Yin, Zhi-Hua Ye, Zhi-Zhong A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title | A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title_full | A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title_fullStr | A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title_full_unstemmed | A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title_short | A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
title_sort | predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6781562/ https://www.ncbi.nlm.nih.gov/pubmed/31612041 http://dx.doi.org/10.3892/ol.2019.10881 |
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