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Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis

Psoriasis is a chronic inflammatory skin disorder that impairs the quality of life of affected patients. Emerging studies indicate that certain long non-coding RNAs (lncRNAs) have important roles in psoriasis. However, the exact functions of lncRNAs and their regulatory mechanisms as competitive end...

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Autores principales: Zhou, Qianqian, Yu, Qian, Gong, Yu, Liu, Zhicui, Xu, Hui, Wang, Yao, Shi, Yuling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6781786/
https://www.ncbi.nlm.nih.gov/pubmed/31611939
http://dx.doi.org/10.3892/etm.2019.8035
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author Zhou, Qianqian
Yu, Qian
Gong, Yu
Liu, Zhicui
Xu, Hui
Wang, Yao
Shi, Yuling
author_facet Zhou, Qianqian
Yu, Qian
Gong, Yu
Liu, Zhicui
Xu, Hui
Wang, Yao
Shi, Yuling
author_sort Zhou, Qianqian
collection PubMed
description Psoriasis is a chronic inflammatory skin disorder that impairs the quality of life of affected patients. Emerging studies indicate that certain long non-coding RNAs (lncRNAs) have important roles in psoriasis. However, the exact functions of lncRNAs and their regulatory mechanisms as competitive endogenous RNAs (ceRNAs) in psoriasis have remained to be fully elucidated. In the present study, differentially expressed lncRNAs, microRNAs (miRNAs) and mRNAs were identified by analyzing public datasets, and a psoriasis-associated lncRNA-miRNA-mRNA network was constructed based on the ceRNA theory. Furthermore, previously validated abnormally expressed miRNAs in psoriasis were identified by a systematic literature search in the PubMed and Web of Science databases, and a specific miRNA-associated lncRNA-miRNA-mRNA sub-network was extracted. Furthermore, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were performed using DAVID 6.8. A total of 253 lncRNAs, 106 miRNAs and 1,156 mRNAs were identified as being differentially expressed between psoriasis skin and healthy control skin. The present study identified two key lncRNAs that may potentially have a role in the pathogenesis of psoriasis: AL035425.3 and Prader Willi/Angelman region RNA 6. This integrative analysis enhances the understanding of the molecular mechanism of psoriasis and may provide novel therapeutic targets for the treatment of psoriasis.
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spelling pubmed-67817862019-10-14 Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis Zhou, Qianqian Yu, Qian Gong, Yu Liu, Zhicui Xu, Hui Wang, Yao Shi, Yuling Exp Ther Med Articles Psoriasis is a chronic inflammatory skin disorder that impairs the quality of life of affected patients. Emerging studies indicate that certain long non-coding RNAs (lncRNAs) have important roles in psoriasis. However, the exact functions of lncRNAs and their regulatory mechanisms as competitive endogenous RNAs (ceRNAs) in psoriasis have remained to be fully elucidated. In the present study, differentially expressed lncRNAs, microRNAs (miRNAs) and mRNAs were identified by analyzing public datasets, and a psoriasis-associated lncRNA-miRNA-mRNA network was constructed based on the ceRNA theory. Furthermore, previously validated abnormally expressed miRNAs in psoriasis were identified by a systematic literature search in the PubMed and Web of Science databases, and a specific miRNA-associated lncRNA-miRNA-mRNA sub-network was extracted. Furthermore, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were performed using DAVID 6.8. A total of 253 lncRNAs, 106 miRNAs and 1,156 mRNAs were identified as being differentially expressed between psoriasis skin and healthy control skin. The present study identified two key lncRNAs that may potentially have a role in the pathogenesis of psoriasis: AL035425.3 and Prader Willi/Angelman region RNA 6. This integrative analysis enhances the understanding of the molecular mechanism of psoriasis and may provide novel therapeutic targets for the treatment of psoriasis. D.A. Spandidos 2019-11 2019-09-23 /pmc/articles/PMC6781786/ /pubmed/31611939 http://dx.doi.org/10.3892/etm.2019.8035 Text en Copyright: © Zhou et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Zhou, Qianqian
Yu, Qian
Gong, Yu
Liu, Zhicui
Xu, Hui
Wang, Yao
Shi, Yuling
Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title_full Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title_fullStr Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title_full_unstemmed Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title_short Construction of a lncRNA-miRNA-mRNA network to determine the regulatory roles of lncRNAs in psoriasis
title_sort construction of a lncrna-mirna-mrna network to determine the regulatory roles of lncrnas in psoriasis
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6781786/
https://www.ncbi.nlm.nih.gov/pubmed/31611939
http://dx.doi.org/10.3892/etm.2019.8035
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