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Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma
We attempted to establish a magnetic resonance imaging (MRI)-based radiomic model for stratifying prognostic subgroups of newly diagnosed glioblastoma (GBM) patients and predicting O (6)-methylguanine-DNA methyltransferase promotor methylation (pMGMT-met) status of the tumor. Preoperative MRI scans...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6783410/ https://www.ncbi.nlm.nih.gov/pubmed/31594994 http://dx.doi.org/10.1038/s41598-019-50849-y |
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author | Sasaki, Takahiro Kinoshita, Manabu Fujita, Koji Fukai, Junya Hayashi, Nobuhide Uematsu, Yuji Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Uda, Takehiro Tsuyuguchi, Naohiro Arita, Hideyuki Mori, Kanji Ishibashi, Kenichi Takano, Koji Nishida, Namiko Shofuda, Tomoko Yoshioka, Ema Kanematsu, Daisuke Kodama, Yoshinori Mano, Masayuki Nakao, Naoyuki Kanemura, Yonehiro |
author_facet | Sasaki, Takahiro Kinoshita, Manabu Fujita, Koji Fukai, Junya Hayashi, Nobuhide Uematsu, Yuji Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Uda, Takehiro Tsuyuguchi, Naohiro Arita, Hideyuki Mori, Kanji Ishibashi, Kenichi Takano, Koji Nishida, Namiko Shofuda, Tomoko Yoshioka, Ema Kanematsu, Daisuke Kodama, Yoshinori Mano, Masayuki Nakao, Naoyuki Kanemura, Yonehiro |
author_sort | Sasaki, Takahiro |
collection | PubMed |
description | We attempted to establish a magnetic resonance imaging (MRI)-based radiomic model for stratifying prognostic subgroups of newly diagnosed glioblastoma (GBM) patients and predicting O (6)-methylguanine-DNA methyltransferase promotor methylation (pMGMT-met) status of the tumor. Preoperative MRI scans from 201 newly diagnosed GBM patients were included in this study. A total of 489 texture features including the first-order feature, second-order features from 162 datasets, and location data from 182 datasets were collected. Supervised principal component analysis was used for prognostication and predictive modeling for pMGMT-met status was performed based on least absolute shrinkage and selection operator regression. 22 radiomic features that were correlated with prognosis were used to successfully stratify patients into high-risk and low-risk groups (p = 0.004, Log-rank test). The radiomic high- and low-risk stratification and pMGMT status were independent prognostic factors. As a matter of fact, predictive accuracy of the pMGMT methylation status was 67% when modeled by two significant radiomic features. A significant survival difference was observed among the combined high-risk group, combined intermediate-risk group (this group consists of radiomic low risk and pMGMT-unmet or radiomic high risk and pMGMT-met), and combined low-risk group (p = 0.0003, Log-rank test). Radiomics can be used to build a prognostic score for stratifying high- and low-risk GBM, which was an independent prognostic factor from pMGMT methylation status. On the other hand, predictive accuracy of the pMGMT methylation status by radiomic analysis was insufficient for practical use. |
format | Online Article Text |
id | pubmed-6783410 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67834102019-10-16 Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma Sasaki, Takahiro Kinoshita, Manabu Fujita, Koji Fukai, Junya Hayashi, Nobuhide Uematsu, Yuji Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Uda, Takehiro Tsuyuguchi, Naohiro Arita, Hideyuki Mori, Kanji Ishibashi, Kenichi Takano, Koji Nishida, Namiko Shofuda, Tomoko Yoshioka, Ema Kanematsu, Daisuke Kodama, Yoshinori Mano, Masayuki Nakao, Naoyuki Kanemura, Yonehiro Sci Rep Article We attempted to establish a magnetic resonance imaging (MRI)-based radiomic model for stratifying prognostic subgroups of newly diagnosed glioblastoma (GBM) patients and predicting O (6)-methylguanine-DNA methyltransferase promotor methylation (pMGMT-met) status of the tumor. Preoperative MRI scans from 201 newly diagnosed GBM patients were included in this study. A total of 489 texture features including the first-order feature, second-order features from 162 datasets, and location data from 182 datasets were collected. Supervised principal component analysis was used for prognostication and predictive modeling for pMGMT-met status was performed based on least absolute shrinkage and selection operator regression. 22 radiomic features that were correlated with prognosis were used to successfully stratify patients into high-risk and low-risk groups (p = 0.004, Log-rank test). The radiomic high- and low-risk stratification and pMGMT status were independent prognostic factors. As a matter of fact, predictive accuracy of the pMGMT methylation status was 67% when modeled by two significant radiomic features. A significant survival difference was observed among the combined high-risk group, combined intermediate-risk group (this group consists of radiomic low risk and pMGMT-unmet or radiomic high risk and pMGMT-met), and combined low-risk group (p = 0.0003, Log-rank test). Radiomics can be used to build a prognostic score for stratifying high- and low-risk GBM, which was an independent prognostic factor from pMGMT methylation status. On the other hand, predictive accuracy of the pMGMT methylation status by radiomic analysis was insufficient for practical use. Nature Publishing Group UK 2019-10-08 /pmc/articles/PMC6783410/ /pubmed/31594994 http://dx.doi.org/10.1038/s41598-019-50849-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Sasaki, Takahiro Kinoshita, Manabu Fujita, Koji Fukai, Junya Hayashi, Nobuhide Uematsu, Yuji Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Uda, Takehiro Tsuyuguchi, Naohiro Arita, Hideyuki Mori, Kanji Ishibashi, Kenichi Takano, Koji Nishida, Namiko Shofuda, Tomoko Yoshioka, Ema Kanematsu, Daisuke Kodama, Yoshinori Mano, Masayuki Nakao, Naoyuki Kanemura, Yonehiro Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title | Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title_full | Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title_fullStr | Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title_full_unstemmed | Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title_short | Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma |
title_sort | radiomics and mgmt promoter methylation for prognostication of newly diagnosed glioblastoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6783410/ https://www.ncbi.nlm.nih.gov/pubmed/31594994 http://dx.doi.org/10.1038/s41598-019-50849-y |
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