Cargando…

ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna

Understanding and counteracting biodiversity losses requires quantitative knowledge on species distribution and abundance across space and time, as well as integrated and interoperable information on climate conditions and climatic changes. In this paper we developed a new biodiversity-climate datab...

Descripción completa

Detalles Bibliográficos
Autores principales: Marta, Silvio, Brunetti, Michele, Ficetola, Gentile Francesco, Stoch, Fabio, Amori, Giovanni, Cesaroni, Donatella, Sbordoni, Valerio, Provenzale, Antonello
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6783616/
https://www.ncbi.nlm.nih.gov/pubmed/31594943
http://dx.doi.org/10.1038/s41597-019-0203-6
_version_ 1783457591268999168
author Marta, Silvio
Brunetti, Michele
Ficetola, Gentile Francesco
Stoch, Fabio
Amori, Giovanni
Cesaroni, Donatella
Sbordoni, Valerio
Provenzale, Antonello
author_facet Marta, Silvio
Brunetti, Michele
Ficetola, Gentile Francesco
Stoch, Fabio
Amori, Giovanni
Cesaroni, Donatella
Sbordoni, Valerio
Provenzale, Antonello
author_sort Marta, Silvio
collection PubMed
description Understanding and counteracting biodiversity losses requires quantitative knowledge on species distribution and abundance across space and time, as well as integrated and interoperable information on climate conditions and climatic changes. In this paper we developed a new biodiversity-climate database for Italy, ClimCKmap, based on the critical analysis, quality estimation and subsequent integration of the CKmap database with several high-resolution climate datasets. The original database was quality-checked for errors in toponym, species name and dating; the retained records were georeferenced and their distribution polygonised via Voronoi tessellation. We then integrated the species distribution information with several high-resolution climatic datasets: average monthly minimum and maximum temperature and total monthly precipitation were reconstructed for each Voronoi cell and year. The resulting database contains 268,977 occurrence records from 8,445 binomials and 16,332 localities, dating between 1680 and 2006 CE. This dataset, fully available at 10.6084/m9.figshare.7906739.v4 and http://hdl.handle.net/21.11125/a91f85cb-befd-4e14-8e83-24f17c4a0491, represents the largest, fully quality-checked, spatially, temporally and climatically explicit distribution database ever assembled for the Italian fauna, now ready for scientific exploitation.
format Online
Article
Text
id pubmed-6783616
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-67836162019-10-10 ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna Marta, Silvio Brunetti, Michele Ficetola, Gentile Francesco Stoch, Fabio Amori, Giovanni Cesaroni, Donatella Sbordoni, Valerio Provenzale, Antonello Sci Data Data Descriptor Understanding and counteracting biodiversity losses requires quantitative knowledge on species distribution and abundance across space and time, as well as integrated and interoperable information on climate conditions and climatic changes. In this paper we developed a new biodiversity-climate database for Italy, ClimCKmap, based on the critical analysis, quality estimation and subsequent integration of the CKmap database with several high-resolution climate datasets. The original database was quality-checked for errors in toponym, species name and dating; the retained records were georeferenced and their distribution polygonised via Voronoi tessellation. We then integrated the species distribution information with several high-resolution climatic datasets: average monthly minimum and maximum temperature and total monthly precipitation were reconstructed for each Voronoi cell and year. The resulting database contains 268,977 occurrence records from 8,445 binomials and 16,332 localities, dating between 1680 and 2006 CE. This dataset, fully available at 10.6084/m9.figshare.7906739.v4 and http://hdl.handle.net/21.11125/a91f85cb-befd-4e14-8e83-24f17c4a0491, represents the largest, fully quality-checked, spatially, temporally and climatically explicit distribution database ever assembled for the Italian fauna, now ready for scientific exploitation. Nature Publishing Group UK 2019-10-08 /pmc/articles/PMC6783616/ /pubmed/31594943 http://dx.doi.org/10.1038/s41597-019-0203-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Marta, Silvio
Brunetti, Michele
Ficetola, Gentile Francesco
Stoch, Fabio
Amori, Giovanni
Cesaroni, Donatella
Sbordoni, Valerio
Provenzale, Antonello
ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title_full ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title_fullStr ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title_full_unstemmed ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title_short ClimCKmap, a spatially, temporally and climatically explicit distribution database for the Italian fauna
title_sort climckmap, a spatially, temporally and climatically explicit distribution database for the italian fauna
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6783616/
https://www.ncbi.nlm.nih.gov/pubmed/31594943
http://dx.doi.org/10.1038/s41597-019-0203-6
work_keys_str_mv AT martasilvio climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT brunettimichele climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT ficetolagentilefrancesco climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT stochfabio climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT amorigiovanni climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT cesaronidonatella climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT sbordonivalerio climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna
AT provenzaleantonello climckmapaspatiallytemporallyandclimaticallyexplicitdistributiondatabasefortheitalianfauna