Cargando…

Hepatitis C virus genotype 1 and 2 recombinant genomes and the phylogeographic history of the 2k/1b lineage

Recombination is an important driver of genetic diversity, though it is relatively uncommon in hepatitis C virus (HCV). Recent investigation of sequence data acquired from HCV clinical trials produced twenty-one full-genome recombinant viruses belonging to three putative inter-subtype forms 2b/1a, 2...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hostager, Reilly, Ragonnet-Cronin, Manon, Murrell, Ben, Hedskog, Charlotte, Osinusi, Anu, Susser, Simone, Sarrazin, Christoph, Svarovskaia, Evguenia, Wertheim, Joel O
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2019
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6785677/ https://www.ncbi.nlm.nih.gov/pubmed/31616569 http://dx.doi.org/10.1093/ve/vez041

Ejemplares similares

Adaptation of hepatitis C virus to interferon lambda polymorphism across multiple viral genotypes
por: Chaturvedi, Nimisha, et al.
Publicado: (2019)

Interplay Between Geography and HIV Transmission Clusters in Los Angeles County
por: Skaathun, Britt, et al.
Publicado: (2021)

Minimizing recombinations in consensus networks for phylogeographic studies
por: Parida, Laxmi, et al.
Publicado: (2009)

Recombination-aware phylogeographic inference using the structured coalescent with ancestral recombination
por: Guo, Fangfang, et al.
Publicado: (2022)

Phylodynamic and phylogeographic analysis of the complete genome of the West Nile virus lineage 2 (WNV-2) in the Mediterranean basin
por: Srihi, Haythem, et al.
Publicado: (2021)

Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2
por: Wertheim, Joel O., et al.
Publicado: (2009)

Updated Phylogeny of Chikungunya Virus Suggests Lineage-Specific RNA Architecture
por: de Bernardi Schneider, Adriano, et al.
Publicado: (2019)

Genetic conservation of SARS-CoV-2 RNA replication complex in globally circulating isolates and recently emerged variants from humans and minks suggests minimal pre-existing resistance to remdesivir
por: Martin, Ross, et al.
Publicado: (2021)

Analysis of Hepatitis B Virus Genotype D in Greenland Suggests the Presence of a Novel Quasi-Subgenotype
por: de Bernardi Schneider, Adriano, et al.
Publicado: (2021)

HIV-1 Modulates the tRNA Pool to Improve Translation Efficiency
por: van Weringh, Anna, et al.
Publicado: (2011)

Identification of the barrier to gene flow between phylogeographic lineages of the common hamster Cricetus cricetus
por: Banaszek, Agata, et al.
Publicado: (2012)

Phylogeographic separation and formation of sexually discrete lineages in a global population of Yersinia pseudotuberculosis
por: Seecharran, Tristan, et al.
Publicado: (2017)

Global Phylogeographic and Admixture Patterns in Grey Wolves and Genetic Legacy of An Ancient Siberian Lineage
por: Pilot, Małgorzata, et al.
Publicado: (2019)

Phylogeographic analysis reveals an ancient East African origin of human herpes simplex virus 2 dispersal out-of-Africa
por: Havens, Jennifer L., et al.
Publicado: (2022)

Human Immunodeficiency Virus (HIV) Genetic Diversity Informs Stage of HIV-1 Infection Among Patients Receiving Antiretroviral Therapy in Botswana
por: Ragonnet-Cronin, Manon, et al.
Publicado: (2021)

Evaluating whole HIV-1 genome sequence for estimation of incidence and migration in a rural South African community
por: Nascimento, Fabrícia F, et al.
Publicado: (2022)

The triple combination of tenofovir, emtricitabine and efavirenz shows synergistic anti-HIV-1 activity in vitro: a mechanism of action study
por: Feng, Joy Y, et al.
Publicado: (2009)

Identification of 19 Novel Hepatitis C Virus Subtypes—Further Expanding HCV Classification
por: Hedskog, Charlotte, et al.
Publicado: (2019)

Consideration of Viral Resistance for Optimization of Direct Antiviral Therapy of Hepatitis C Virus Genotype 1-Infected Patients
por: Dietz, Julia, et al.
Publicado: (2015)

A Phylogeographic Analysis of Porcine Parvovirus 1 in Africa
por: Franzo, Giovanni, et al.
Publicado: (2023)

Integrating phylogeographic and ecological niche approaches to delimitating cryptic lineages in the blue–green damselfish (Chromis viridis)
por: Liu, Shang Yin Vanson, et al.
Publicado: (2019)

Novel recombinant SARS-CoV-2 lineage detected through genomic surveillance in Wales, UK
por: Pacchiarini, Nicole, et al.
Publicado: (2023)

The emergence of NS5B resistance associated substitution S282T after sofosbuvir‐based treatment
por: Gane, Edward J., et al.
Publicado: (2017)

A novel recombinant variant of latent membrane protein 1 from Epstein Barr virus in Argentina denotes phylogeographical association
por: Gantuz, Magdalena, et al.
Publicado: (2017)

Analysis of the history and spread of HIV-1 in Uganda using phylodynamics
por: Yebra, Gonzalo, et al.
Publicado: (2015)

Inferring the ecological niche of bat viruses closely related to SARS-CoV-2 using phylogeographic analyses of Rhinolophus species
por: Hassanin, Alexandre, et al.
Publicado: (2021)

Unequal contribution of native South African phylogeographic lineages to the invasion of the African clawed frog, Xenopus laevis, in Europe
por: De Busschere, Charlotte, et al.
Publicado: (2016)

Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus
por: Castillo-Ramírez, Santiago, et al.
Publicado: (2012)

MLVA Based Classification of Mycobacterium tuberculosis Complex Lineages for a Robust Phylogeographic Snapshot of Its Worldwide Molecular Diversity
por: Hill, Véronique, et al.
Publicado: (2012)

Unveiling Current Guanaco Distribution in Chile Based upon Niche Structure of Phylogeographic Lineages: Andean Puna to Subpolar Forests
por: González, Benito A., et al.
Publicado: (2013)

Biogeography of Italy revisited: genetic lineages confirm major phylogeographic patterns and a pre-Pleistocene origin of its biota
por: Schmitt, Thomas, et al.
Publicado: (2021)

Phylogeographic Analysis of HIV-1 Subtype C Dissemination in Southern Brazil
por: Bello, Gonzalo, et al.
Publicado: (2012)

Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic
por: Yebra, Gonzalo, et al.
Publicado: (2016)

Homoeologous Recombination of the V1r1-V1r2 Gene Cluster of Pheromone Receptors in an Allotetraploid Lineage of Teleosts
por: Zhong, Lei, et al.
Publicado: (2017)

Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach
por: Paraskevis, Dimitrios, et al.
Publicado: (2009)

cpDNA microsatellite markers for Lemna minor (Araceae): Phylogeographic implications(1)
por: Wani, Gowher A., et al.
Publicado: (2014)

Phylodynamic and Phylogeographic Profiles of Subtype B HIV-1 Epidemics in South Spain
por: Pérez-Parra, Santiago, et al.
Publicado: (2016)

Phylogeographic history of grey wolves in Europe
por: Pilot, Małgorzata, et al.
Publicado: (2010)

Phylogeographic insights into an irruptive pest outbreak
por: Cullingham, Catherine I, et al.
Publicado: (2012)

A Phylogeographic Investigation of African Monkeypox
por: Nakazawa, Yoshinori, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_ldh7lmaae091kt9guv77u9677b