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Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures

Single-stranded DNA (ssDNA) molecules in solution typically form coiled structures, therefore stretching ssDNA is extremely crucial before applying any nanotechnology for ssDNA analysis. Recent advances in material fabrication enable the deployment of nanochannels to manipulate, stretch, sort and ma...

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Detalles Bibliográficos
Autores principales: Luan, Binquan, Zhou, Ruhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6787186/
https://www.ncbi.nlm.nih.gov/pubmed/31601816
http://dx.doi.org/10.1038/s41467-019-12584-w
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author Luan, Binquan
Zhou, Ruhong
author_facet Luan, Binquan
Zhou, Ruhong
author_sort Luan, Binquan
collection PubMed
description Single-stranded DNA (ssDNA) molecules in solution typically form coiled structures, therefore stretching ssDNA is extremely crucial before applying any nanotechnology for ssDNA analysis. Recent advances in material fabrication enable the deployment of nanochannels to manipulate, stretch, sort and map double-stranded DNA (dsDNA) molecules, however nanochannels fail to stretch ssDNA molecules due to the ultra-short persistence length and the potential nonspecific-interaction-induced clogging. Given the significance of ssDNA stretching in genome analysis, here we report an ssDNA stretching platform: two dimensional in-plane heterostructure comprising graphene and hexagonal boron nitride (h-BN), and show that ssDNA can be stretched on a h-BN nanostripe sandwiched between two adjacent graphene domains (“nanochannel”). We further show that with a biasing voltage the stretched ssDNA can be electrophoretically transported along the “nanochannel”, allowing easy controls/manipulations. When being conveniently integrated with existing atomic resolution sensors, the heterostructure platform paves the way for sequencing DNA on a planar surface.
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spelling pubmed-67871862019-10-15 Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures Luan, Binquan Zhou, Ruhong Nat Commun Article Single-stranded DNA (ssDNA) molecules in solution typically form coiled structures, therefore stretching ssDNA is extremely crucial before applying any nanotechnology for ssDNA analysis. Recent advances in material fabrication enable the deployment of nanochannels to manipulate, stretch, sort and map double-stranded DNA (dsDNA) molecules, however nanochannels fail to stretch ssDNA molecules due to the ultra-short persistence length and the potential nonspecific-interaction-induced clogging. Given the significance of ssDNA stretching in genome analysis, here we report an ssDNA stretching platform: two dimensional in-plane heterostructure comprising graphene and hexagonal boron nitride (h-BN), and show that ssDNA can be stretched on a h-BN nanostripe sandwiched between two adjacent graphene domains (“nanochannel”). We further show that with a biasing voltage the stretched ssDNA can be electrophoretically transported along the “nanochannel”, allowing easy controls/manipulations. When being conveniently integrated with existing atomic resolution sensors, the heterostructure platform paves the way for sequencing DNA on a planar surface. Nature Publishing Group UK 2019-10-10 /pmc/articles/PMC6787186/ /pubmed/31601816 http://dx.doi.org/10.1038/s41467-019-12584-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Luan, Binquan
Zhou, Ruhong
Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title_full Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title_fullStr Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title_full_unstemmed Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title_short Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures
title_sort spontaneous ssdna stretching on graphene and hexagonal boron nitride in plane heterostructures
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6787186/
https://www.ncbi.nlm.nih.gov/pubmed/31601816
http://dx.doi.org/10.1038/s41467-019-12584-w
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