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Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada
We report high-quality closed reference genomes for 1 bovine strain and 10 human Shiga toxin (Stx)-producing Escherichia coli (STEC) strains from serogroups O26, O45, O91, O103, O104, O111, O113, O121, O145, and O157. We also report draft assemblies, with standardized metadata, for 360 STEC strains...
| Autores principales: | , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
American Society for Microbiology
2019
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6787312/ https://www.ncbi.nlm.nih.gov/pubmed/31601655 http://dx.doi.org/10.1128/MRA.00625-19 |
| _version_ | 1783458241295941632 |
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| author | Tyson, Shari Peterson, Christy-Lynn Olson, Adam Tyler, Shaun Knox, Natalie Griffiths, Emma Dooley, Damion Hsiao, William Cabral, Jennifer Johnson, Roger P. Laing, Chad Gannon, Victor Lynch, Tarah Van Domselaar, Gary Brinkman, Fiona Graham, Morag |
| author_facet | Tyson, Shari Peterson, Christy-Lynn Olson, Adam Tyler, Shaun Knox, Natalie Griffiths, Emma Dooley, Damion Hsiao, William Cabral, Jennifer Johnson, Roger P. Laing, Chad Gannon, Victor Lynch, Tarah Van Domselaar, Gary Brinkman, Fiona Graham, Morag |
| author_sort | Tyson, Shari |
| collection | PubMed |
| description | We report high-quality closed reference genomes for 1 bovine strain and 10 human Shiga toxin (Stx)-producing Escherichia coli (STEC) strains from serogroups O26, O45, O91, O103, O104, O111, O113, O121, O145, and O157. We also report draft assemblies, with standardized metadata, for 360 STEC strains isolated from watersheds, animals, farms, food, and human infections. |
| format | Online Article Text |
| id | pubmed-6787312 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2019 |
| publisher | American Society for Microbiology |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-67873122019-10-21 Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada Tyson, Shari Peterson, Christy-Lynn Olson, Adam Tyler, Shaun Knox, Natalie Griffiths, Emma Dooley, Damion Hsiao, William Cabral, Jennifer Johnson, Roger P. Laing, Chad Gannon, Victor Lynch, Tarah Van Domselaar, Gary Brinkman, Fiona Graham, Morag Microbiol Resour Announc Genome Sequences We report high-quality closed reference genomes for 1 bovine strain and 10 human Shiga toxin (Stx)-producing Escherichia coli (STEC) strains from serogroups O26, O45, O91, O103, O104, O111, O113, O121, O145, and O157. We also report draft assemblies, with standardized metadata, for 360 STEC strains isolated from watersheds, animals, farms, food, and human infections. American Society for Microbiology 2019-10-10 /pmc/articles/PMC6787312/ /pubmed/31601655 http://dx.doi.org/10.1128/MRA.00625-19 Text en © Crown copyright 2019. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
| spellingShingle | Genome Sequences Tyson, Shari Peterson, Christy-Lynn Olson, Adam Tyler, Shaun Knox, Natalie Griffiths, Emma Dooley, Damion Hsiao, William Cabral, Jennifer Johnson, Roger P. Laing, Chad Gannon, Victor Lynch, Tarah Van Domselaar, Gary Brinkman, Fiona Graham, Morag Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title | Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title_full | Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title_fullStr | Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title_full_unstemmed | Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title_short | Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada |
| title_sort | eleven high-quality reference genome sequences and 360 draft assemblies of shiga toxin-producing escherichia coli isolates from human, food, animal, and environmental sources in canada |
| topic | Genome Sequences |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6787312/ https://www.ncbi.nlm.nih.gov/pubmed/31601655 http://dx.doi.org/10.1128/MRA.00625-19 |
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