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Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review
Mycobacterium tuberculosis (Mtb) is an endemic bacterium worldwide that causes tuberculosis (TB) and involves long-term treatment that is not always effective. In this context, several studies are trying to develop and evaluate new substances active against Mtb. In silico techniques are often used t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6789803/ https://www.ncbi.nlm.nih.gov/pubmed/31527425 http://dx.doi.org/10.3390/ph12030135 |
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author | Timo, Giulia Oliveira dos Reis, Rodrigo Souza Silva Valle de Melo, Adriana Françozo Costa, Thales Viana Labourdette Magalhães, Pérola de Oliveira Homem-de-Mello, Mauricio |
author_facet | Timo, Giulia Oliveira dos Reis, Rodrigo Souza Silva Valle de Melo, Adriana Françozo Costa, Thales Viana Labourdette Magalhães, Pérola de Oliveira Homem-de-Mello, Mauricio |
author_sort | Timo, Giulia Oliveira |
collection | PubMed |
description | Mycobacterium tuberculosis (Mtb) is an endemic bacterium worldwide that causes tuberculosis (TB) and involves long-term treatment that is not always effective. In this context, several studies are trying to develop and evaluate new substances active against Mtb. In silico techniques are often used to predict the effects on some known target. We used a systematic approach to find and evaluate manuscripts that applied an in silico technique to find antimycobacterial molecules and tried to prove its predictive potential by testing them in vitro or in vivo. After searching three different databases and applying exclusion criteria, we were able to retrieve 46 documents. We found that they all follow a similar screening procedure, but few studies exploited equal targets, exploring the interaction of multiple ligands to 29 distinct enzymes. The following in vitro/vivo analysis showed that, although the virtual assays were able to decrease the number of molecules tested, saving time and money, virtual screening procedures still need to develop the correlation to more favorable in vitro outcomes. We find that the in silico approach has a good predictive power for in vitro results, but call for more studies to evaluate its clinical predictive possibilities. |
format | Online Article Text |
id | pubmed-6789803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67898032019-10-16 Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review Timo, Giulia Oliveira dos Reis, Rodrigo Souza Silva Valle de Melo, Adriana Françozo Costa, Thales Viana Labourdette Magalhães, Pérola de Oliveira Homem-de-Mello, Mauricio Pharmaceuticals (Basel) Review Mycobacterium tuberculosis (Mtb) is an endemic bacterium worldwide that causes tuberculosis (TB) and involves long-term treatment that is not always effective. In this context, several studies are trying to develop and evaluate new substances active against Mtb. In silico techniques are often used to predict the effects on some known target. We used a systematic approach to find and evaluate manuscripts that applied an in silico technique to find antimycobacterial molecules and tried to prove its predictive potential by testing them in vitro or in vivo. After searching three different databases and applying exclusion criteria, we were able to retrieve 46 documents. We found that they all follow a similar screening procedure, but few studies exploited equal targets, exploring the interaction of multiple ligands to 29 distinct enzymes. The following in vitro/vivo analysis showed that, although the virtual assays were able to decrease the number of molecules tested, saving time and money, virtual screening procedures still need to develop the correlation to more favorable in vitro outcomes. We find that the in silico approach has a good predictive power for in vitro results, but call for more studies to evaluate its clinical predictive possibilities. MDPI 2019-09-16 /pmc/articles/PMC6789803/ /pubmed/31527425 http://dx.doi.org/10.3390/ph12030135 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Timo, Giulia Oliveira dos Reis, Rodrigo Souza Silva Valle de Melo, Adriana Françozo Costa, Thales Viana Labourdette Magalhães, Pérola de Oliveira Homem-de-Mello, Mauricio Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title | Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title_full | Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title_fullStr | Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title_full_unstemmed | Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title_short | Predictive Power of In Silico Approach to Evaluate Chemicals against M. tuberculosis: A Systematic Review |
title_sort | predictive power of in silico approach to evaluate chemicals against m. tuberculosis: a systematic review |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6789803/ https://www.ncbi.nlm.nih.gov/pubmed/31527425 http://dx.doi.org/10.3390/ph12030135 |
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