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A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction

Background: Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene activity is altered v...

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Autores principales: Hedgpeth, Bryan, Missall, Roy, Bambaci, Anna, Smolen, Matthew, Yavuz, Sevgi, Cottrell, Jessica, Chu, Tinchun, Chang, Sulie L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6789846/
https://www.ncbi.nlm.nih.gov/pubmed/31349598
http://dx.doi.org/10.3390/medicines6030079
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author Hedgpeth, Bryan
Missall, Roy
Bambaci, Anna
Smolen, Matthew
Yavuz, Sevgi
Cottrell, Jessica
Chu, Tinchun
Chang, Sulie L.
author_facet Hedgpeth, Bryan
Missall, Roy
Bambaci, Anna
Smolen, Matthew
Yavuz, Sevgi
Cottrell, Jessica
Chu, Tinchun
Chang, Sulie L.
author_sort Hedgpeth, Bryan
collection PubMed
description Background: Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene activity is altered via competition for metabolic pathways. Simultaneous intake of ethanol and acetaminophen results in overactive CYP2E1 and depletion of glutathione, leaving NAPQI to build up in the liver. NAPQI is a hepatotoxic substance typically neutralized by glutathione. Methods: Bioinformatics tools including PharmGKB, Chemical Annotation Retrieval Toolkit, Transcriptome Analysis Console 4.0 (TAC), wikipathways, STRING, and Ingenuity Pathway Analysis (IPA) were used to explore interactive metabolic pathways of ethanol-acetaminophen exposure as a proof of concept for assessing drug-drug or drug-alcohol interactions. Results: As the ethanol-acetaminophen comparison indicates, bioinformatics tools may be used to understand interactive pathways following exposure to ethanol and acetaminophen, with potential extrapolation to other drug-drug/drug-ethanol interactions. Conclusions: Direct interactive effects were not able to be confirmed through this bioinformatics study due to the lack of existing ethanol-acetaminophen simultaneous exposure data. This work suggests that a battery of software applications should be used to assess interactive effects.
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spelling pubmed-67898462019-10-16 A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction Hedgpeth, Bryan Missall, Roy Bambaci, Anna Smolen, Matthew Yavuz, Sevgi Cottrell, Jessica Chu, Tinchun Chang, Sulie L. Medicines (Basel) Article Background: Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene activity is altered via competition for metabolic pathways. Simultaneous intake of ethanol and acetaminophen results in overactive CYP2E1 and depletion of glutathione, leaving NAPQI to build up in the liver. NAPQI is a hepatotoxic substance typically neutralized by glutathione. Methods: Bioinformatics tools including PharmGKB, Chemical Annotation Retrieval Toolkit, Transcriptome Analysis Console 4.0 (TAC), wikipathways, STRING, and Ingenuity Pathway Analysis (IPA) were used to explore interactive metabolic pathways of ethanol-acetaminophen exposure as a proof of concept for assessing drug-drug or drug-alcohol interactions. Results: As the ethanol-acetaminophen comparison indicates, bioinformatics tools may be used to understand interactive pathways following exposure to ethanol and acetaminophen, with potential extrapolation to other drug-drug/drug-ethanol interactions. Conclusions: Direct interactive effects were not able to be confirmed through this bioinformatics study due to the lack of existing ethanol-acetaminophen simultaneous exposure data. This work suggests that a battery of software applications should be used to assess interactive effects. MDPI 2019-07-25 /pmc/articles/PMC6789846/ /pubmed/31349598 http://dx.doi.org/10.3390/medicines6030079 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hedgpeth, Bryan
Missall, Roy
Bambaci, Anna
Smolen, Matthew
Yavuz, Sevgi
Cottrell, Jessica
Chu, Tinchun
Chang, Sulie L.
A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_full A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_fullStr A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_full_unstemmed A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_short A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_sort review of bioinformatics tools to understand acetaminophen-alcohol interaction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6789846/
https://www.ncbi.nlm.nih.gov/pubmed/31349598
http://dx.doi.org/10.3390/medicines6030079
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