FoldX 5.0: working with RNA, small molecules and a new graphical interface

SUMMARY: A new version of FoldX, whose main new features allows running classic FoldX commands on structures containing RNA molecules and includes a module that allows parametrization of ligands or small molecules (ParamX) that were not previously recognized in old versions, has been released. An ex...

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Detalles Bibliográficos
Autores principales: Delgado, Javier, Radusky, Leandro G, Cianferoni, Damiano, Serrano, Luis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6792092/
https://www.ncbi.nlm.nih.gov/pubmed/30874800
http://dx.doi.org/10.1093/bioinformatics/btz184
Descripción
Sumario:SUMMARY: A new version of FoldX, whose main new features allows running classic FoldX commands on structures containing RNA molecules and includes a module that allows parametrization of ligands or small molecules (ParamX) that were not previously recognized in old versions, has been released. An extended FoldX graphical user interface has also being developed (available as a python plugin for the YASARA molecular viewer) allowing user-friendly parametrization of new custom user molecules encoded using JSON format. AVAILABILITY AND IMPLEMENTATION: http://foldxsuite.crg.eu/

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