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Rare missense variants in the human cytosolic antibody receptor preserve antiviral function
The genetic basis of most human disease cannot be explained by common variants. One solution to this ‘missing heritability problem’ may be rare missense variants, which are individually scarce but collectively abundant. However, the phenotypic impact of rare variants is under-appreciated as gene fun...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6794091/ https://www.ncbi.nlm.nih.gov/pubmed/31613747 http://dx.doi.org/10.7554/eLife.48339 |
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author | Zeng, Jingwei Slodkowicz, Greg James, Leo C |
author_facet | Zeng, Jingwei Slodkowicz, Greg James, Leo C |
author_sort | Zeng, Jingwei |
collection | PubMed |
description | The genetic basis of most human disease cannot be explained by common variants. One solution to this ‘missing heritability problem’ may be rare missense variants, which are individually scarce but collectively abundant. However, the phenotypic impact of rare variants is under-appreciated as gene function is normally studied in the context of a single ‘wild-type’ sequence. Here, we explore the impact of naturally occurring missense variants in the human population on the cytosolic antibody receptor TRIM21, using volunteer cells with variant haplotypes, CRISPR gene editing and functional reconstitution. In combination with data from a panel of computational predictors, the results suggest that protein robustness and purifying selection ensure that function is remarkably well-maintained despite coding variation. |
format | Online Article Text |
id | pubmed-6794091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-67940912019-10-17 Rare missense variants in the human cytosolic antibody receptor preserve antiviral function Zeng, Jingwei Slodkowicz, Greg James, Leo C eLife Human Biology and Medicine The genetic basis of most human disease cannot be explained by common variants. One solution to this ‘missing heritability problem’ may be rare missense variants, which are individually scarce but collectively abundant. However, the phenotypic impact of rare variants is under-appreciated as gene function is normally studied in the context of a single ‘wild-type’ sequence. Here, we explore the impact of naturally occurring missense variants in the human population on the cytosolic antibody receptor TRIM21, using volunteer cells with variant haplotypes, CRISPR gene editing and functional reconstitution. In combination with data from a panel of computational predictors, the results suggest that protein robustness and purifying selection ensure that function is remarkably well-maintained despite coding variation. eLife Sciences Publications, Ltd 2019-10-15 /pmc/articles/PMC6794091/ /pubmed/31613747 http://dx.doi.org/10.7554/eLife.48339 Text en © 2019, Zeng et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Human Biology and Medicine Zeng, Jingwei Slodkowicz, Greg James, Leo C Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title | Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title_full | Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title_fullStr | Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title_full_unstemmed | Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title_short | Rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
title_sort | rare missense variants in the human cytosolic antibody receptor preserve antiviral function |
topic | Human Biology and Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6794091/ https://www.ncbi.nlm.nih.gov/pubmed/31613747 http://dx.doi.org/10.7554/eLife.48339 |
work_keys_str_mv | AT zengjingwei raremissensevariantsinthehumancytosolicantibodyreceptorpreserveantiviralfunction AT slodkowiczgreg raremissensevariantsinthehumancytosolicantibodyreceptorpreserveantiviralfunction AT jamesleoc raremissensevariantsinthehumancytosolicantibodyreceptorpreserveantiviralfunction |