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A bacterial pioneer produces cellulase complexes that persist through community succession

Cultivation of microbial consortia provides low-complexity communities that can serve as tractable models to understand community dynamics. Time-resolved metagenomics demonstrated that an aerobic cellulolytic consortium cultivated from compost exhibited community dynamics consistent with the definit...

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Autores principales: Kolinko, Sebastian, Wu, Yu-Wei, Tachea, Firehiwot, Denzel, Evelyn, Hiras, Jennifer, Gabriel, Raphael, Bäcker, Nora, Chan, Leanne Jade G., Eichorst, Stephanie A., Frey, Dario, Chen, Qiushi, Azadi, Parastoo, Adams, Paul D., Pray, Todd R., Tanjore, Deepti, Petzold, Christopher J., Gladden, John M., Simmons, Blake A., Singer, Steven W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6794216/
https://www.ncbi.nlm.nih.gov/pubmed/29109478
http://dx.doi.org/10.1038/s41564-017-0052-z
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author Kolinko, Sebastian
Wu, Yu-Wei
Tachea, Firehiwot
Denzel, Evelyn
Hiras, Jennifer
Gabriel, Raphael
Bäcker, Nora
Chan, Leanne Jade G.
Eichorst, Stephanie A.
Frey, Dario
Chen, Qiushi
Azadi, Parastoo
Adams, Paul D.
Pray, Todd R.
Tanjore, Deepti
Petzold, Christopher J.
Gladden, John M.
Simmons, Blake A.
Singer, Steven W.
author_facet Kolinko, Sebastian
Wu, Yu-Wei
Tachea, Firehiwot
Denzel, Evelyn
Hiras, Jennifer
Gabriel, Raphael
Bäcker, Nora
Chan, Leanne Jade G.
Eichorst, Stephanie A.
Frey, Dario
Chen, Qiushi
Azadi, Parastoo
Adams, Paul D.
Pray, Todd R.
Tanjore, Deepti
Petzold, Christopher J.
Gladden, John M.
Simmons, Blake A.
Singer, Steven W.
author_sort Kolinko, Sebastian
collection PubMed
description Cultivation of microbial consortia provides low-complexity communities that can serve as tractable models to understand community dynamics. Time-resolved metagenomics demonstrated that an aerobic cellulolytic consortium cultivated from compost exhibited community dynamics consistent with the definition of an endogenous heterotrophic succession. The genome of the proposed pioneer population, ‘Candidatus Reconcilibacillus cellulovorans’, possessed a gene cluster containing multidomain glycoside hydrolases (GHs). Purification of the soluble cellulase activity from a 300litre cultivation of this consortium revealed that ~70% of the activity arose from the ‘Ca. Reconcilibacillus cellulovorans’ multidomain GHs assembled into cellulase complexes through glycosylation. These remarkably stable complexes have supramolecular structures for enzymatic cellulose hydrolysis that are distinct from cellulosomes. The persistence of these complexes during cultivation indicates that they may be active through multiple cultivations of this consortium and act as public goods that sustain the community. The provision of extracellular GHs as public goods may influence microbial community dynamics in native biomass-deconstructing communities relevant to agriculture, human health and biotechnology.
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spelling pubmed-67942162019-10-17 A bacterial pioneer produces cellulase complexes that persist through community succession Kolinko, Sebastian Wu, Yu-Wei Tachea, Firehiwot Denzel, Evelyn Hiras, Jennifer Gabriel, Raphael Bäcker, Nora Chan, Leanne Jade G. Eichorst, Stephanie A. Frey, Dario Chen, Qiushi Azadi, Parastoo Adams, Paul D. Pray, Todd R. Tanjore, Deepti Petzold, Christopher J. Gladden, John M. Simmons, Blake A. Singer, Steven W. Nat Microbiol Article Cultivation of microbial consortia provides low-complexity communities that can serve as tractable models to understand community dynamics. Time-resolved metagenomics demonstrated that an aerobic cellulolytic consortium cultivated from compost exhibited community dynamics consistent with the definition of an endogenous heterotrophic succession. The genome of the proposed pioneer population, ‘Candidatus Reconcilibacillus cellulovorans’, possessed a gene cluster containing multidomain glycoside hydrolases (GHs). Purification of the soluble cellulase activity from a 300litre cultivation of this consortium revealed that ~70% of the activity arose from the ‘Ca. Reconcilibacillus cellulovorans’ multidomain GHs assembled into cellulase complexes through glycosylation. These remarkably stable complexes have supramolecular structures for enzymatic cellulose hydrolysis that are distinct from cellulosomes. The persistence of these complexes during cultivation indicates that they may be active through multiple cultivations of this consortium and act as public goods that sustain the community. The provision of extracellular GHs as public goods may influence microbial community dynamics in native biomass-deconstructing communities relevant to agriculture, human health and biotechnology. Nature Publishing Group UK 2017-11-06 2018 /pmc/articles/PMC6794216/ /pubmed/29109478 http://dx.doi.org/10.1038/s41564-017-0052-z Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kolinko, Sebastian
Wu, Yu-Wei
Tachea, Firehiwot
Denzel, Evelyn
Hiras, Jennifer
Gabriel, Raphael
Bäcker, Nora
Chan, Leanne Jade G.
Eichorst, Stephanie A.
Frey, Dario
Chen, Qiushi
Azadi, Parastoo
Adams, Paul D.
Pray, Todd R.
Tanjore, Deepti
Petzold, Christopher J.
Gladden, John M.
Simmons, Blake A.
Singer, Steven W.
A bacterial pioneer produces cellulase complexes that persist through community succession
title A bacterial pioneer produces cellulase complexes that persist through community succession
title_full A bacterial pioneer produces cellulase complexes that persist through community succession
title_fullStr A bacterial pioneer produces cellulase complexes that persist through community succession
title_full_unstemmed A bacterial pioneer produces cellulase complexes that persist through community succession
title_short A bacterial pioneer produces cellulase complexes that persist through community succession
title_sort bacterial pioneer produces cellulase complexes that persist through community succession
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6794216/
https://www.ncbi.nlm.nih.gov/pubmed/29109478
http://dx.doi.org/10.1038/s41564-017-0052-z
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