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Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells

R2 is a long interspersed element (LINE) found in a specific sequence of the 28S rDNA among a wide variety of animals. Recently, we observed that R2Ol isolated from medaka fish, Oryzias latipes, retrotransposes sequence specifically into the target sequence of zebrafish. Because the 28S target and f...

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Autores principales: Su, Yuting, Nichuguti, Narisu, Kuroki-Kami, Azusa, Fujiwara, Haruhiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6795142/
https://www.ncbi.nlm.nih.gov/pubmed/31434792
http://dx.doi.org/10.1261/rna.072512.119
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author Su, Yuting
Nichuguti, Narisu
Kuroki-Kami, Azusa
Fujiwara, Haruhiko
author_facet Su, Yuting
Nichuguti, Narisu
Kuroki-Kami, Azusa
Fujiwara, Haruhiko
author_sort Su, Yuting
collection PubMed
description R2 is a long interspersed element (LINE) found in a specific sequence of the 28S rDNA among a wide variety of animals. Recently, we observed that R2Ol isolated from medaka fish, Oryzias latipes, retrotransposes sequence specifically into the target sequence of zebrafish. Because the 28S target and flanking regions are widely conserved among vertebrates, we examined whether R2Ol can also integrate in a sequence-specific manner in human cells. Using adenovirus-mediated expression of R2Ol constructs, we confirmed an accurate insertion of R2Ol into the 28S target of human 293T cells. However, the R2Ol mutant devoid of endonuclease (EN) activity showed no retrotransposition ability, suggesting that the sequence-specific integration of R2Ol into 28S rDNA occurs via the cleavage activity of EN. By introducing both R2Ol helper virus and donor plasmid in human cells, we succeeded in retrotransposing an exogenous EGFP gene into the 28S target site by the trans-complementation system, which enabled simplification of specific gene knock-in in a time-efficient manner. We believe that R2Ol may provide an alternative targeted gene knock-in method for practical applications such as gene therapy in future.
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spelling pubmed-67951422019-11-01 Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells Su, Yuting Nichuguti, Narisu Kuroki-Kami, Azusa Fujiwara, Haruhiko RNA Report R2 is a long interspersed element (LINE) found in a specific sequence of the 28S rDNA among a wide variety of animals. Recently, we observed that R2Ol isolated from medaka fish, Oryzias latipes, retrotransposes sequence specifically into the target sequence of zebrafish. Because the 28S target and flanking regions are widely conserved among vertebrates, we examined whether R2Ol can also integrate in a sequence-specific manner in human cells. Using adenovirus-mediated expression of R2Ol constructs, we confirmed an accurate insertion of R2Ol into the 28S target of human 293T cells. However, the R2Ol mutant devoid of endonuclease (EN) activity showed no retrotransposition ability, suggesting that the sequence-specific integration of R2Ol into 28S rDNA occurs via the cleavage activity of EN. By introducing both R2Ol helper virus and donor plasmid in human cells, we succeeded in retrotransposing an exogenous EGFP gene into the 28S target site by the trans-complementation system, which enabled simplification of specific gene knock-in in a time-efficient manner. We believe that R2Ol may provide an alternative targeted gene knock-in method for practical applications such as gene therapy in future. Cold Spring Harbor Laboratory Press 2019-11 /pmc/articles/PMC6795142/ /pubmed/31434792 http://dx.doi.org/10.1261/rna.072512.119 Text en © 2019 Su et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society http://creativecommons.org/licenses/by-nc/4.0/ This article, published in RNA, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.
spellingShingle Report
Su, Yuting
Nichuguti, Narisu
Kuroki-Kami, Azusa
Fujiwara, Haruhiko
Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title_full Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title_fullStr Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title_full_unstemmed Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title_short Sequence-specific retrotransposition of 28S rDNA-specific LINE R2Ol in human cells
title_sort sequence-specific retrotransposition of 28s rdna-specific line r2ol in human cells
topic Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6795142/
https://www.ncbi.nlm.nih.gov/pubmed/31434792
http://dx.doi.org/10.1261/rna.072512.119
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