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Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and scree...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796361/ https://www.ncbi.nlm.nih.gov/pubmed/31623568 http://dx.doi.org/10.1186/s12881-019-0896-6 |
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author | Li, Juan Sun, Li Sun, Jinghui Yan, Min |
author_facet | Li, Juan Sun, Li Sun, Jinghui Yan, Min |
author_sort | Li, Juan |
collection | PubMed |
description | BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and screened the studies for pooling. Finally, a total of eighteen eligible case-control studies were included. BH (Benjamini & Hochberg) adjusted P-values of association (P(association)) and odd ratios (ORs) with the corresponding 95% confidence intervals (CIs) were calculated under the allele, homozygote, heterozygote, dominant, recessive, and carrier models. RESULTS: Compared with the negative controls, no statistically significant difference in the odds of psoriasis was detected for the cases under any genetic models (BH adjusted P(association) > 0.05). We also performed subgroup meta-analyses by the source of controls, ethnicity, country, Hardy-Weinberg equilibrium, and genotyping method. Similar results were observed in most subgroup meta-analyses (BH adjusted P(association) > 0.05). Besides, data of Begg’s and Egger’s tests excluded the significant publication bias; while the sensitivity analysis data further indicated the statistical reliability of our pooling results. CONCLUSION: The currently available data fails to support a robust association between VDR rs7975232, rs1544410, rs2228570 and rs731236 polymorphisms and psoriasis susceptibility, which still required the support of more case-control studies. |
format | Online Article Text |
id | pubmed-6796361 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-67963612019-10-21 Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis Li, Juan Sun, Li Sun, Jinghui Yan, Min BMC Med Genet Research Article BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and screened the studies for pooling. Finally, a total of eighteen eligible case-control studies were included. BH (Benjamini & Hochberg) adjusted P-values of association (P(association)) and odd ratios (ORs) with the corresponding 95% confidence intervals (CIs) were calculated under the allele, homozygote, heterozygote, dominant, recessive, and carrier models. RESULTS: Compared with the negative controls, no statistically significant difference in the odds of psoriasis was detected for the cases under any genetic models (BH adjusted P(association) > 0.05). We also performed subgroup meta-analyses by the source of controls, ethnicity, country, Hardy-Weinberg equilibrium, and genotyping method. Similar results were observed in most subgroup meta-analyses (BH adjusted P(association) > 0.05). Besides, data of Begg’s and Egger’s tests excluded the significant publication bias; while the sensitivity analysis data further indicated the statistical reliability of our pooling results. CONCLUSION: The currently available data fails to support a robust association between VDR rs7975232, rs1544410, rs2228570 and rs731236 polymorphisms and psoriasis susceptibility, which still required the support of more case-control studies. BioMed Central 2019-10-17 /pmc/articles/PMC6796361/ /pubmed/31623568 http://dx.doi.org/10.1186/s12881-019-0896-6 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Li, Juan Sun, Li Sun, Jinghui Yan, Min Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title | Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title_full | Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title_fullStr | Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title_full_unstemmed | Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title_short | Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis |
title_sort | pooling analysis regarding the impact of human vitamin d receptor variants on the odds of psoriasis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796361/ https://www.ncbi.nlm.nih.gov/pubmed/31623568 http://dx.doi.org/10.1186/s12881-019-0896-6 |
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