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Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis

BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and scree...

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Autores principales: Li, Juan, Sun, Li, Sun, Jinghui, Yan, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796361/
https://www.ncbi.nlm.nih.gov/pubmed/31623568
http://dx.doi.org/10.1186/s12881-019-0896-6
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author Li, Juan
Sun, Li
Sun, Jinghui
Yan, Min
author_facet Li, Juan
Sun, Li
Sun, Jinghui
Yan, Min
author_sort Li, Juan
collection PubMed
description BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and screened the studies for pooling. Finally, a total of eighteen eligible case-control studies were included. BH (Benjamini & Hochberg) adjusted P-values of association (P(association)) and odd ratios (ORs) with the corresponding 95% confidence intervals (CIs) were calculated under the allele, homozygote, heterozygote, dominant, recessive, and carrier models. RESULTS: Compared with the negative controls, no statistically significant difference in the odds of psoriasis was detected for the cases under any genetic models (BH adjusted P(association) > 0.05). We also performed subgroup meta-analyses by the source of controls, ethnicity, country, Hardy-Weinberg equilibrium, and genotyping method. Similar results were observed in most subgroup meta-analyses (BH adjusted P(association) > 0.05). Besides, data of Begg’s and Egger’s tests excluded the significant publication bias; while the sensitivity analysis data further indicated the statistical reliability of our pooling results. CONCLUSION: The currently available data fails to support a robust association between VDR rs7975232, rs1544410, rs2228570 and rs731236 polymorphisms and psoriasis susceptibility, which still required the support of more case-control studies.
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spelling pubmed-67963612019-10-21 Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis Li, Juan Sun, Li Sun, Jinghui Yan, Min BMC Med Genet Research Article BACKGROUND: The study aims at scientifically investigating the genetic effect of four polymorphisms (rs7975232, rs1544410, rs2228570, and rs731236) within the human Vitamin D Receptor (VDR) gene on the odds of psoriasis through an updated meta-analysis. METHODS: We searched eight databases and screened the studies for pooling. Finally, a total of eighteen eligible case-control studies were included. BH (Benjamini & Hochberg) adjusted P-values of association (P(association)) and odd ratios (ORs) with the corresponding 95% confidence intervals (CIs) were calculated under the allele, homozygote, heterozygote, dominant, recessive, and carrier models. RESULTS: Compared with the negative controls, no statistically significant difference in the odds of psoriasis was detected for the cases under any genetic models (BH adjusted P(association) > 0.05). We also performed subgroup meta-analyses by the source of controls, ethnicity, country, Hardy-Weinberg equilibrium, and genotyping method. Similar results were observed in most subgroup meta-analyses (BH adjusted P(association) > 0.05). Besides, data of Begg’s and Egger’s tests excluded the significant publication bias; while the sensitivity analysis data further indicated the statistical reliability of our pooling results. CONCLUSION: The currently available data fails to support a robust association between VDR rs7975232, rs1544410, rs2228570 and rs731236 polymorphisms and psoriasis susceptibility, which still required the support of more case-control studies. BioMed Central 2019-10-17 /pmc/articles/PMC6796361/ /pubmed/31623568 http://dx.doi.org/10.1186/s12881-019-0896-6 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Li, Juan
Sun, Li
Sun, Jinghui
Yan, Min
Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title_full Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title_fullStr Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title_full_unstemmed Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title_short Pooling analysis regarding the impact of human vitamin D receptor variants on the odds of psoriasis
title_sort pooling analysis regarding the impact of human vitamin d receptor variants on the odds of psoriasis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796361/
https://www.ncbi.nlm.nih.gov/pubmed/31623568
http://dx.doi.org/10.1186/s12881-019-0896-6
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