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Thermodynamics of Supramolecular Associations with Macrocyclic Water-Soluble Hosts
[Image: see text] The thermodynamic study of the complexation of the β-cyclodextrins and p-sulfonatocalix[n]arenes (CnS) with the 4-aminoazobenzene was reported and was carried out by molecular dynamics simulations. We determined the whole thermodynamic properties (K, Δ(r)G°, Δ(r)H°, and TΔ(r)S°) us...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796899/ https://www.ncbi.nlm.nih.gov/pubmed/31646236 http://dx.doi.org/10.1021/acsomega.9b02136 |
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author | Garnier, Ludovic Bonal, Christine Malfreyt, Patrice |
author_facet | Garnier, Ludovic Bonal, Christine Malfreyt, Patrice |
author_sort | Garnier, Ludovic |
collection | PubMed |
description | [Image: see text] The thermodynamic study of the complexation of the β-cyclodextrins and p-sulfonatocalix[n]arenes (CnS) with the 4-aminoazobenzene was reported and was carried out by molecular dynamics simulations. We determined the whole thermodynamic properties (K, Δ(r)G°, Δ(r)H°, and TΔ(r)S°) using the potential of mean force (PMF) technique and more precisely the adaptive biasing force method. Depending on both the nature of the host molecule and the pH of the solution, the PMF profiles present different shapes and energy minima. Considering the complexity of these PMF profiles, we are also interested in the structural properties of these associations. Hence, we calculated hydrogen bonds, Lennard-Jones and electrostatic energies, the number of atoms of the guest molecule inserted inside the cagelike host molecule, and the number of water molecules expelled from the cavity. |
format | Online Article Text |
id | pubmed-6796899 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-67968992019-10-23 Thermodynamics of Supramolecular Associations with Macrocyclic Water-Soluble Hosts Garnier, Ludovic Bonal, Christine Malfreyt, Patrice ACS Omega [Image: see text] The thermodynamic study of the complexation of the β-cyclodextrins and p-sulfonatocalix[n]arenes (CnS) with the 4-aminoazobenzene was reported and was carried out by molecular dynamics simulations. We determined the whole thermodynamic properties (K, Δ(r)G°, Δ(r)H°, and TΔ(r)S°) using the potential of mean force (PMF) technique and more precisely the adaptive biasing force method. Depending on both the nature of the host molecule and the pH of the solution, the PMF profiles present different shapes and energy minima. Considering the complexity of these PMF profiles, we are also interested in the structural properties of these associations. Hence, we calculated hydrogen bonds, Lennard-Jones and electrostatic energies, the number of atoms of the guest molecule inserted inside the cagelike host molecule, and the number of water molecules expelled from the cavity. American Chemical Society 2019-10-01 /pmc/articles/PMC6796899/ /pubmed/31646236 http://dx.doi.org/10.1021/acsomega.9b02136 Text en Copyright © 2019 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Garnier, Ludovic Bonal, Christine Malfreyt, Patrice Thermodynamics of Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title | Thermodynamics of
Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title_full | Thermodynamics of
Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title_fullStr | Thermodynamics of
Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title_full_unstemmed | Thermodynamics of
Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title_short | Thermodynamics of
Supramolecular Associations with Macrocyclic Water-Soluble Hosts |
title_sort | thermodynamics of
supramolecular associations with macrocyclic water-soluble hosts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796899/ https://www.ncbi.nlm.nih.gov/pubmed/31646236 http://dx.doi.org/10.1021/acsomega.9b02136 |
work_keys_str_mv | AT garnierludovic thermodynamicsofsupramolecularassociationswithmacrocyclicwatersolublehosts AT bonalchristine thermodynamicsofsupramolecularassociationswithmacrocyclicwatersolublehosts AT malfreytpatrice thermodynamicsofsupramolecularassociationswithmacrocyclicwatersolublehosts |