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A Bayesian space–time model for clustering areal units based on their disease trends

Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identif...

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Detalles Bibliográficos
Autores principales: Napier, Gary, Lee, Duncan, Robertson, Chris, Lawson, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797054/
https://www.ncbi.nlm.nih.gov/pubmed/29917057
http://dx.doi.org/10.1093/biostatistics/kxy024
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author Napier, Gary
Lee, Duncan
Robertson, Chris
Lawson, Andrew
author_facet Napier, Gary
Lee, Duncan
Robertson, Chris
Lawson, Andrew
author_sort Napier, Gary
collection PubMed
description Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identify groups of areal units exhibiting similar temporal disease trends. We present a novel Bayesian hierarchical mixture model for achieving this goal, with inference based on a Metropolis-coupled Markov chain Monte Carlo ((MC) [Formula: see text]) algorithm. The effectiveness of the (MC) [Formula: see text] algorithm compared to a standard Markov chain Monte Carlo implementation is demonstrated in a simulation study, and the methodology is motivated by two important case studies in the United Kingdom. The first concerns the impact on measles susceptibility of the discredited paper linking the measles, mumps, and rubella vaccination to an increased risk of Autism and investigates whether all areas in the Scotland were equally affected. The second concerns respiratory hospitalizations and investigates over a 10 year period which parts of Glasgow have shown increased, decreased, and no change in risk.
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spelling pubmed-67970542019-10-21 A Bayesian space–time model for clustering areal units based on their disease trends Napier, Gary Lee, Duncan Robertson, Chris Lawson, Andrew Biostatistics Articles Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identify groups of areal units exhibiting similar temporal disease trends. We present a novel Bayesian hierarchical mixture model for achieving this goal, with inference based on a Metropolis-coupled Markov chain Monte Carlo ((MC) [Formula: see text]) algorithm. The effectiveness of the (MC) [Formula: see text] algorithm compared to a standard Markov chain Monte Carlo implementation is demonstrated in a simulation study, and the methodology is motivated by two important case studies in the United Kingdom. The first concerns the impact on measles susceptibility of the discredited paper linking the measles, mumps, and rubella vaccination to an increased risk of Autism and investigates whether all areas in the Scotland were equally affected. The second concerns respiratory hospitalizations and investigates over a 10 year period which parts of Glasgow have shown increased, decreased, and no change in risk. Oxford University Press 2019-10 2018-06-18 /pmc/articles/PMC6797054/ /pubmed/29917057 http://dx.doi.org/10.1093/biostatistics/kxy024 Text en © The Author 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Napier, Gary
Lee, Duncan
Robertson, Chris
Lawson, Andrew
A Bayesian space–time model for clustering areal units based on their disease trends
title A Bayesian space–time model for clustering areal units based on their disease trends
title_full A Bayesian space–time model for clustering areal units based on their disease trends
title_fullStr A Bayesian space–time model for clustering areal units based on their disease trends
title_full_unstemmed A Bayesian space–time model for clustering areal units based on their disease trends
title_short A Bayesian space–time model for clustering areal units based on their disease trends
title_sort bayesian space–time model for clustering areal units based on their disease trends
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797054/
https://www.ncbi.nlm.nih.gov/pubmed/29917057
http://dx.doi.org/10.1093/biostatistics/kxy024
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