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A Bayesian space–time model for clustering areal units based on their disease trends
Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identif...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797054/ https://www.ncbi.nlm.nih.gov/pubmed/29917057 http://dx.doi.org/10.1093/biostatistics/kxy024 |
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author | Napier, Gary Lee, Duncan Robertson, Chris Lawson, Andrew |
author_facet | Napier, Gary Lee, Duncan Robertson, Chris Lawson, Andrew |
author_sort | Napier, Gary |
collection | PubMed |
description | Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identify groups of areal units exhibiting similar temporal disease trends. We present a novel Bayesian hierarchical mixture model for achieving this goal, with inference based on a Metropolis-coupled Markov chain Monte Carlo ((MC) [Formula: see text]) algorithm. The effectiveness of the (MC) [Formula: see text] algorithm compared to a standard Markov chain Monte Carlo implementation is demonstrated in a simulation study, and the methodology is motivated by two important case studies in the United Kingdom. The first concerns the impact on measles susceptibility of the discredited paper linking the measles, mumps, and rubella vaccination to an increased risk of Autism and investigates whether all areas in the Scotland were equally affected. The second concerns respiratory hospitalizations and investigates over a 10 year period which parts of Glasgow have shown increased, decreased, and no change in risk. |
format | Online Article Text |
id | pubmed-6797054 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-67970542019-10-21 A Bayesian space–time model for clustering areal units based on their disease trends Napier, Gary Lee, Duncan Robertson, Chris Lawson, Andrew Biostatistics Articles Population-level disease risk across a set of non-overlapping areal units varies in space and time, and a large research literature has developed methodology for identifying clusters of areal units exhibiting elevated risks. However, almost no research has extended the clustering paradigm to identify groups of areal units exhibiting similar temporal disease trends. We present a novel Bayesian hierarchical mixture model for achieving this goal, with inference based on a Metropolis-coupled Markov chain Monte Carlo ((MC) [Formula: see text]) algorithm. The effectiveness of the (MC) [Formula: see text] algorithm compared to a standard Markov chain Monte Carlo implementation is demonstrated in a simulation study, and the methodology is motivated by two important case studies in the United Kingdom. The first concerns the impact on measles susceptibility of the discredited paper linking the measles, mumps, and rubella vaccination to an increased risk of Autism and investigates whether all areas in the Scotland were equally affected. The second concerns respiratory hospitalizations and investigates over a 10 year period which parts of Glasgow have shown increased, decreased, and no change in risk. Oxford University Press 2019-10 2018-06-18 /pmc/articles/PMC6797054/ /pubmed/29917057 http://dx.doi.org/10.1093/biostatistics/kxy024 Text en © The Author 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Napier, Gary Lee, Duncan Robertson, Chris Lawson, Andrew A Bayesian space–time model for clustering areal units based on their disease trends |
title | A Bayesian space–time model for clustering areal units based on their disease trends |
title_full | A Bayesian space–time model for clustering areal units based on their disease trends |
title_fullStr | A Bayesian space–time model for clustering areal units based on their disease trends |
title_full_unstemmed | A Bayesian space–time model for clustering areal units based on their disease trends |
title_short | A Bayesian space–time model for clustering areal units based on their disease trends |
title_sort | bayesian space–time model for clustering areal units based on their disease trends |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797054/ https://www.ncbi.nlm.nih.gov/pubmed/29917057 http://dx.doi.org/10.1093/biostatistics/kxy024 |
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