Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine

Here, we report the complete genome sequence of an African swine fever (ASF) virus (ASFV/Kyiv/2016/131) isolated from the spleen of a domestic pig in Ukraine with a lethal case of African swine fever. Using only long-read Nanopore sequences, we assembled a full-length genome of 191,911 base pairs in...

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Autores principales: Kovalenko, Ganna, Ducluzeau, Anne-Lise, Ishchenko, Liudmyla, Sushko, Mykola, Sapachova, Maryna, Rudova, Nataliia, Solodiankin, Oleksii, Gerilovych, Anton, Dagdag, Ralf, Redlinger, Matthew, Bezymennyi, Maksym, Frant, Maciej, Lange, Christian E., Dubchak, Inna, Mezhenskyi, Andrii A., Nychyk, Serhiy, Bortz, Eric, Drown, Devin M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797529/
https://www.ncbi.nlm.nih.gov/pubmed/31624164
http://dx.doi.org/10.1128/MRA.00883-19
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author Kovalenko, Ganna
Ducluzeau, Anne-Lise
Ishchenko, Liudmyla
Sushko, Mykola
Sapachova, Maryna
Rudova, Nataliia
Solodiankin, Oleksii
Gerilovych, Anton
Dagdag, Ralf
Redlinger, Matthew
Bezymennyi, Maksym
Frant, Maciej
Lange, Christian E.
Dubchak, Inna
Mezhenskyi, Andrii A.
Nychyk, Serhiy
Bortz, Eric
Drown, Devin M.
author_facet Kovalenko, Ganna
Ducluzeau, Anne-Lise
Ishchenko, Liudmyla
Sushko, Mykola
Sapachova, Maryna
Rudova, Nataliia
Solodiankin, Oleksii
Gerilovych, Anton
Dagdag, Ralf
Redlinger, Matthew
Bezymennyi, Maksym
Frant, Maciej
Lange, Christian E.
Dubchak, Inna
Mezhenskyi, Andrii A.
Nychyk, Serhiy
Bortz, Eric
Drown, Devin M.
author_sort Kovalenko, Ganna
collection PubMed
description Here, we report the complete genome sequence of an African swine fever (ASF) virus (ASFV/Kyiv/2016/131) isolated from the spleen of a domestic pig in Ukraine with a lethal case of African swine fever. Using only long-read Nanopore sequences, we assembled a full-length genome of 191,911 base pairs in a single contig.
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spelling pubmed-67975292019-10-21 Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine Kovalenko, Ganna Ducluzeau, Anne-Lise Ishchenko, Liudmyla Sushko, Mykola Sapachova, Maryna Rudova, Nataliia Solodiankin, Oleksii Gerilovych, Anton Dagdag, Ralf Redlinger, Matthew Bezymennyi, Maksym Frant, Maciej Lange, Christian E. Dubchak, Inna Mezhenskyi, Andrii A. Nychyk, Serhiy Bortz, Eric Drown, Devin M. Microbiol Resour Announc Genome Sequences Here, we report the complete genome sequence of an African swine fever (ASF) virus (ASFV/Kyiv/2016/131) isolated from the spleen of a domestic pig in Ukraine with a lethal case of African swine fever. Using only long-read Nanopore sequences, we assembled a full-length genome of 191,911 base pairs in a single contig. American Society for Microbiology 2019-10-17 /pmc/articles/PMC6797529/ /pubmed/31624164 http://dx.doi.org/10.1128/MRA.00883-19 Text en Copyright © 2019 Kovalenko et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Kovalenko, Ganna
Ducluzeau, Anne-Lise
Ishchenko, Liudmyla
Sushko, Mykola
Sapachova, Maryna
Rudova, Nataliia
Solodiankin, Oleksii
Gerilovych, Anton
Dagdag, Ralf
Redlinger, Matthew
Bezymennyi, Maksym
Frant, Maciej
Lange, Christian E.
Dubchak, Inna
Mezhenskyi, Andrii A.
Nychyk, Serhiy
Bortz, Eric
Drown, Devin M.
Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title_full Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title_fullStr Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title_full_unstemmed Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title_short Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine
title_sort complete genome sequence of a virulent african swine fever virus from a domestic pig in ukraine
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797529/
https://www.ncbi.nlm.nih.gov/pubmed/31624164
http://dx.doi.org/10.1128/MRA.00883-19
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