Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing

Hybrid de novo assembly of Illumina/Nanopore sequence data produced a complete circular sequence of the chromosome for a Clostridioides difficile ribotype 255 (RT255) isolate from an elderly patient with recurrent C. difficile infection (CDI). This provides a high-quality representative sequence for...

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Detalles Bibliográficos
Autores principales: Spinler, Jennifer K., Gonzales-Luna, Anne J., Raza, Sabeen, Runge, Jessica K., Luna, Ruth Ann, Savidge, Tor C., Garey, Kevin W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797532/
https://www.ncbi.nlm.nih.gov/pubmed/31624167
http://dx.doi.org/10.1128/MRA.00935-19
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author Spinler, Jennifer K.
Gonzales-Luna, Anne J.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
Savidge, Tor C.
Garey, Kevin W.
author_facet Spinler, Jennifer K.
Gonzales-Luna, Anne J.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
Savidge, Tor C.
Garey, Kevin W.
author_sort Spinler, Jennifer K.
collection PubMed
description Hybrid de novo assembly of Illumina/Nanopore sequence data produced a complete circular sequence of the chromosome for a Clostridioides difficile ribotype 255 (RT255) isolate from an elderly patient with recurrent C. difficile infection (CDI). This provides a high-quality representative sequence for the RT255 lineage.
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spelling pubmed-67975322019-10-21 Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing Spinler, Jennifer K. Gonzales-Luna, Anne J. Raza, Sabeen Runge, Jessica K. Luna, Ruth Ann Savidge, Tor C. Garey, Kevin W. Microbiol Resour Announc Genome Sequences Hybrid de novo assembly of Illumina/Nanopore sequence data produced a complete circular sequence of the chromosome for a Clostridioides difficile ribotype 255 (RT255) isolate from an elderly patient with recurrent C. difficile infection (CDI). This provides a high-quality representative sequence for the RT255 lineage. American Society for Microbiology 2019-10-17 /pmc/articles/PMC6797532/ /pubmed/31624167 http://dx.doi.org/10.1128/MRA.00935-19 Text en Copyright © 2019 Spinler et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Spinler, Jennifer K.
Gonzales-Luna, Anne J.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
Savidge, Tor C.
Garey, Kevin W.
Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title_full Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title_fullStr Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title_full_unstemmed Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title_short Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
title_sort complete genome sequence of clostridioides difficile ribotype 255 strain mta-79, assembled using oxford nanopore and illumina sequencing
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797532/
https://www.ncbi.nlm.nih.gov/pubmed/31624167
http://dx.doi.org/10.1128/MRA.00935-19
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