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RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797642/ https://www.ncbi.nlm.nih.gov/pubmed/30542912 http://dx.doi.org/10.3758/s13428-018-1163-z |
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author | Gu, Zhengguo Van Deun, Katrijn |
author_facet | Gu, Zhengguo Van Deun, Katrijn |
author_sort | Gu, Zhengguo |
collection | PubMed |
description | This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The key feature of this package is that it allows to (1) identify joint variation that is shared across all the data sources and specific variation that is associated with one or a few of the data sources and (2) flexibly estimate component matrices with predefined structures. Linked data occur in many disciplines (e.g., biomedical research, bioinformatics, chemometrics, finance, genomics, psychology, and sociology) and especially in multidisciplinary research. Hence, we expect our package to be useful in various fields. |
format | Online Article Text |
id | pubmed-6797642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-67976422019-11-01 RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R Gu, Zhengguo Van Deun, Katrijn Behav Res Methods Article This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The key feature of this package is that it allows to (1) identify joint variation that is shared across all the data sources and specific variation that is associated with one or a few of the data sources and (2) flexibly estimate component matrices with predefined structures. Linked data occur in many disciplines (e.g., biomedical research, bioinformatics, chemometrics, finance, genomics, psychology, and sociology) and especially in multidisciplinary research. Hence, we expect our package to be useful in various fields. Springer US 2018-12-12 2019 /pmc/articles/PMC6797642/ /pubmed/30542912 http://dx.doi.org/10.3758/s13428-018-1163-z Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Gu, Zhengguo Van Deun, Katrijn RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title | RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title_full | RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title_fullStr | RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title_full_unstemmed | RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title_short | RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R |
title_sort | regularizedsca: regularized simultaneous component analysis of multiblock data in r |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797642/ https://www.ncbi.nlm.nih.gov/pubmed/30542912 http://dx.doi.org/10.3758/s13428-018-1163-z |
work_keys_str_mv | AT guzhengguo regularizedscaregularizedsimultaneouscomponentanalysisofmultiblockdatainr AT vandeunkatrijn regularizedscaregularizedsimultaneouscomponentanalysisofmultiblockdatainr |