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RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R

This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The...

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Detalles Bibliográficos
Autores principales: Gu, Zhengguo, Van Deun, Katrijn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797642/
https://www.ncbi.nlm.nih.gov/pubmed/30542912
http://dx.doi.org/10.3758/s13428-018-1163-z
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author Gu, Zhengguo
Van Deun, Katrijn
author_facet Gu, Zhengguo
Van Deun, Katrijn
author_sort Gu, Zhengguo
collection PubMed
description This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The key feature of this package is that it allows to (1) identify joint variation that is shared across all the data sources and specific variation that is associated with one or a few of the data sources and (2) flexibly estimate component matrices with predefined structures. Linked data occur in many disciplines (e.g., biomedical research, bioinformatics, chemometrics, finance, genomics, psychology, and sociology) and especially in multidisciplinary research. Hence, we expect our package to be useful in various fields.
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spelling pubmed-67976422019-11-01 RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R Gu, Zhengguo Van Deun, Katrijn Behav Res Methods Article This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The key feature of this package is that it allows to (1) identify joint variation that is shared across all the data sources and specific variation that is associated with one or a few of the data sources and (2) flexibly estimate component matrices with predefined structures. Linked data occur in many disciplines (e.g., biomedical research, bioinformatics, chemometrics, finance, genomics, psychology, and sociology) and especially in multidisciplinary research. Hence, we expect our package to be useful in various fields. Springer US 2018-12-12 2019 /pmc/articles/PMC6797642/ /pubmed/30542912 http://dx.doi.org/10.3758/s13428-018-1163-z Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Gu, Zhengguo
Van Deun, Katrijn
RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title_full RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title_fullStr RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title_full_unstemmed RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title_short RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R
title_sort regularizedsca: regularized simultaneous component analysis of multiblock data in r
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797642/
https://www.ncbi.nlm.nih.gov/pubmed/30542912
http://dx.doi.org/10.3758/s13428-018-1163-z
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