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Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas

Squamous cell carcinoma (SCC) is a unique clinical and histological category that accounts for about 30% of total lung cancer. To identify risk factors for lymph node metastasis and analyze the molecular features of these metastases in lung SCC, a retrospective study was performed for 170 lung SCC p...

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Autores principales: Dong, Ming, Gong, Hao, Li, Tong, Li, Xin, Liu, Jinghao, Zhang, Hongbing, Liu, Minghui, Chen, Gang, Liu, Hongyu, Chen, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797670/
https://www.ncbi.nlm.nih.gov/pubmed/31482686
http://dx.doi.org/10.1002/cam4.2525
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author Dong, Ming
Gong, Hao
Li, Tong
Li, Xin
Liu, Jinghao
Zhang, Hongbing
Liu, Minghui
Chen, Gang
Liu, Hongyu
Chen, Jun
author_facet Dong, Ming
Gong, Hao
Li, Tong
Li, Xin
Liu, Jinghao
Zhang, Hongbing
Liu, Minghui
Chen, Gang
Liu, Hongyu
Chen, Jun
author_sort Dong, Ming
collection PubMed
description Squamous cell carcinoma (SCC) is a unique clinical and histological category that accounts for about 30% of total lung cancer. To identify risk factors for lymph node metastasis and analyze the molecular features of these metastases in lung SCC, a retrospective study was performed for 170 lung SCC patients who underwent surgical treatment. The overall survival of these patients with or without lymph node metastasis (LM/NLM) was analyzed using the Kaplan‐Meier method. We also used the TCGA database to compare the differentially expressed genes (DEGs) in patients with stage T1‐2 and T3‐4 lung SCC. Data from both our retrospective study and the TCGA database demonstrated a correlation between age and stage T1‐T2 LM (P = .002). There were significant differences between the LM and NLM groups in both mean survival time and median survival time for different T‐stages (P = .031). There were 176 upregulated and 177 downregulated DEGs between the LM and NLM groups in the stage T1‐2 group and 93 upregulated and 34 downregulated DEGs in the stage T3‐T4 group. These differentially expressed genes were predicted to participate in five cellular components, five molecular functions, and five biological processes. There were 20 genes, including GCG, CASR, NPY, CGA, TAC1, ALB, APOA1, CRH, CHRH, TRH, and GHSR, located at the core of the protein‐protein interaction network in the stage T1‐2 group and 11 genes, including F2, CASR, GRM1, GNRHR, GRPR, NTSR1, PROKR2, UTS2D, PTH, ALB, and FGA, in the stage T3‐4 group. Overall, LM plays a key role in the treatment response and prognosis of SCC patients. Several risk factors, including age and stage, were identified for LM. There was a previously undiscovered enrichment of significant novel genes in lung SCC between the LM and NLM groups, which may have the potential for predicting prognosis and targeting.
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spelling pubmed-67976702019-10-21 Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas Dong, Ming Gong, Hao Li, Tong Li, Xin Liu, Jinghao Zhang, Hongbing Liu, Minghui Chen, Gang Liu, Hongyu Chen, Jun Cancer Med Clinical Cancer Research Squamous cell carcinoma (SCC) is a unique clinical and histological category that accounts for about 30% of total lung cancer. To identify risk factors for lymph node metastasis and analyze the molecular features of these metastases in lung SCC, a retrospective study was performed for 170 lung SCC patients who underwent surgical treatment. The overall survival of these patients with or without lymph node metastasis (LM/NLM) was analyzed using the Kaplan‐Meier method. We also used the TCGA database to compare the differentially expressed genes (DEGs) in patients with stage T1‐2 and T3‐4 lung SCC. Data from both our retrospective study and the TCGA database demonstrated a correlation between age and stage T1‐T2 LM (P = .002). There were significant differences between the LM and NLM groups in both mean survival time and median survival time for different T‐stages (P = .031). There were 176 upregulated and 177 downregulated DEGs between the LM and NLM groups in the stage T1‐2 group and 93 upregulated and 34 downregulated DEGs in the stage T3‐T4 group. These differentially expressed genes were predicted to participate in five cellular components, five molecular functions, and five biological processes. There were 20 genes, including GCG, CASR, NPY, CGA, TAC1, ALB, APOA1, CRH, CHRH, TRH, and GHSR, located at the core of the protein‐protein interaction network in the stage T1‐2 group and 11 genes, including F2, CASR, GRM1, GNRHR, GRPR, NTSR1, PROKR2, UTS2D, PTH, ALB, and FGA, in the stage T3‐4 group. Overall, LM plays a key role in the treatment response and prognosis of SCC patients. Several risk factors, including age and stage, were identified for LM. There was a previously undiscovered enrichment of significant novel genes in lung SCC between the LM and NLM groups, which may have the potential for predicting prognosis and targeting. John Wiley and Sons Inc. 2019-09-03 /pmc/articles/PMC6797670/ /pubmed/31482686 http://dx.doi.org/10.1002/cam4.2525 Text en © 2019 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Cancer Research
Dong, Ming
Gong, Hao
Li, Tong
Li, Xin
Liu, Jinghao
Zhang, Hongbing
Liu, Minghui
Chen, Gang
Liu, Hongyu
Chen, Jun
Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title_full Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title_fullStr Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title_full_unstemmed Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title_short Lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the Cancer Genome Atlas
title_sort lymph node metastasis in lung squamous cell carcinoma and identification of metastasis‐related genes based on the cancer genome atlas
topic Clinical Cancer Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797670/
https://www.ncbi.nlm.nih.gov/pubmed/31482686
http://dx.doi.org/10.1002/cam4.2525
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