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Differential mechanisms of tolerance to extreme environmental conditions in tardigrades
Tardigrades, also known as water bears, are small aquatic animals that inhabit marine, fresh water or limno-terrestrial environments. While all tardigrades require surrounding water to grow and reproduce, species living in limno-terrestrial environments (e.g. Ramazzottius varieornatus) are able to u...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797769/ https://www.ncbi.nlm.nih.gov/pubmed/31624306 http://dx.doi.org/10.1038/s41598-019-51471-8 |
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author | Carrero, Dido Pérez-Silva, José G. Quesada, Víctor López-Otín, Carlos |
author_facet | Carrero, Dido Pérez-Silva, José G. Quesada, Víctor López-Otín, Carlos |
author_sort | Carrero, Dido |
collection | PubMed |
description | Tardigrades, also known as water bears, are small aquatic animals that inhabit marine, fresh water or limno-terrestrial environments. While all tardigrades require surrounding water to grow and reproduce, species living in limno-terrestrial environments (e.g. Ramazzottius varieornatus) are able to undergo almost complete dehydration by entering an arrested state known as anhydrobiosis, which allows them to tolerate ionic radiation, extreme temperatures and intense pressure. Previous studies based on comparison of the genomes of R. varieornatus and Hypsibius dujardini - a less tolerant tardigrade - have pointed to potential mechanisms that may partially contribute to their remarkable ability to resist extreme physical conditions. In this work, we have further annotated the genomes of both tardigrades using a guided approach in search for novel mechanisms underlying the extremotolerance of R. varieornatus. We have found specific amplifications of several genes, including MRE11 and XPC, and numerous missense variants exclusive of R. varieornatus in CHEK1, POLK, UNG and TERT, all of them involved in important pathways for DNA repair and telomere maintenance. Taken collectively, these results point to genomic features that may contribute to the enhanced ability to resist extreme environmental conditions shown by R. varieornatus. |
format | Online Article Text |
id | pubmed-6797769 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67977692019-10-25 Differential mechanisms of tolerance to extreme environmental conditions in tardigrades Carrero, Dido Pérez-Silva, José G. Quesada, Víctor López-Otín, Carlos Sci Rep Article Tardigrades, also known as water bears, are small aquatic animals that inhabit marine, fresh water or limno-terrestrial environments. While all tardigrades require surrounding water to grow and reproduce, species living in limno-terrestrial environments (e.g. Ramazzottius varieornatus) are able to undergo almost complete dehydration by entering an arrested state known as anhydrobiosis, which allows them to tolerate ionic radiation, extreme temperatures and intense pressure. Previous studies based on comparison of the genomes of R. varieornatus and Hypsibius dujardini - a less tolerant tardigrade - have pointed to potential mechanisms that may partially contribute to their remarkable ability to resist extreme physical conditions. In this work, we have further annotated the genomes of both tardigrades using a guided approach in search for novel mechanisms underlying the extremotolerance of R. varieornatus. We have found specific amplifications of several genes, including MRE11 and XPC, and numerous missense variants exclusive of R. varieornatus in CHEK1, POLK, UNG and TERT, all of them involved in important pathways for DNA repair and telomere maintenance. Taken collectively, these results point to genomic features that may contribute to the enhanced ability to resist extreme environmental conditions shown by R. varieornatus. Nature Publishing Group UK 2019-10-17 /pmc/articles/PMC6797769/ /pubmed/31624306 http://dx.doi.org/10.1038/s41598-019-51471-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Carrero, Dido Pérez-Silva, José G. Quesada, Víctor López-Otín, Carlos Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title | Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title_full | Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title_fullStr | Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title_full_unstemmed | Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title_short | Differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
title_sort | differential mechanisms of tolerance to extreme environmental conditions in tardigrades |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6797769/ https://www.ncbi.nlm.nih.gov/pubmed/31624306 http://dx.doi.org/10.1038/s41598-019-51471-8 |
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