Cargando…

3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD

OBJECTIVES/SPECIFIC AIMS: The objective of this study was to reconstruct patient-specific distal airway patterns at the tissue- and single-cell resolution and develop personalized distal airway models based on utilization of patient-derived DABCs and autologous region-specific stromal cells. METHODS...

Descripción completa

Detalles Bibliográficos
Autores principales: Mahjour, Seyed Babak, Gomi, Kazunori, Rustam, Samir, Dolma, Phurbu, Krishnan, Jamuna, Elemento, Olivier, D’Ovidio, Frank, Blackwell, Timothy S., Randell, Scott, Shaykhiev, Renat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6798976/
http://dx.doi.org/10.1017/cts.2019.352
_version_ 1783460179546734592
author Mahjour, Seyed Babak
Gomi, Kazunori
Rustam, Samir
Dolma, Phurbu
Krishnan, Jamuna
Elemento, Olivier
D’Ovidio, Frank
Blackwell, Timothy S.
Randell, Scott
Shaykhiev, Renat
author_facet Mahjour, Seyed Babak
Gomi, Kazunori
Rustam, Samir
Dolma, Phurbu
Krishnan, Jamuna
Elemento, Olivier
D’Ovidio, Frank
Blackwell, Timothy S.
Randell, Scott
Shaykhiev, Renat
author_sort Mahjour, Seyed Babak
collection PubMed
description OBJECTIVES/SPECIFIC AIMS: The objective of this study was to reconstruct patient-specific distal airway patterns at the tissue- and single-cell resolution and develop personalized distal airway models based on utilization of patient-derived DABCs and autologous region-specific stromal cells. METHODS/STUDY POPULATION: Patient-specific distal airway units, containing parental small bronchiole (<2 mm in diameter, >12(th) generation) and daughter airway branches, including pre-terminal/terminal bronchioles, leading to alveoli (3-7 units/lung), were dissected. Epithelial and stromal cells were isolated from these units and processed for ddSeq single-cell RNA-sequencing (n=6 samples). Autologous DABCs and stromal cells were isolated, propagated, biobanked, and used for establishment of patient-specific distal airway models (3D-organoids and air-liquid interface-based airway wall model; n=10 samples). Region-specific tissue patterns were evaluated using immunofluorescence and laser-capture microdissection (LCM; n=6 samples). RESULTS/ANTICIPATED RESULTS: Single-cell-based human distal airway transcriptome map (constructed based on the analysis of >6,500 distal airway cells obtained from 6 subjects) identified physiological and COPD-relevant distal airway differentiation patterns, including distal airway-specific secretory phenotype (DASP) characterized with high expression of secretoglobins 3A2 and 3A1, surfactant proteins SFTPB and SFTPA2, and mucin 1, unique signatures of DABCs, and stromal (fibroblasts, smooth muscle, endothelial cell subpopulations) and immune (macrophage, T cells, B cell, mast cells). Immunofluorescence analysis and LCM confirmed distribution of cell type-specific markers with differential expression patterns of DABC and DASP signatures. Patient-derived DABC-stromal co-culture models reproduced 3 regenerative patterns: 1) physiological (high DABC-clonogenic potency, establishment of polarized differentiated organoids and DASP-expressing epithelia); 2) hypo-regenerative (failure of DABCs to form clones, spheres and mechanically stable differentiated epithelial barrier); and 3) hyperplastic (generation of DABC hyperplasia accompanied in some COPD samples by mucous-cell hyperplasia mimicking in vivo remodeling patterns). DISCUSSION/SIGNIFICANCE OF IMPACT: Patient-specific maps and models of distal airway regeneration patterns have been established in this study, which can be used to identify candidate pathways that mediate disease-relevant airway remodeling and potentially utilized as pre-clinical platforms for developing personalized therapeutic approaches to suppress the progression of distal airway remodeling in chronic lung diseases, including COPD.
format Online
Article
Text
id pubmed-6798976
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Cambridge University Press
record_format MEDLINE/PubMed
spelling pubmed-67989762019-10-28 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD Mahjour, Seyed Babak Gomi, Kazunori Rustam, Samir Dolma, Phurbu Krishnan, Jamuna Elemento, Olivier D’Ovidio, Frank Blackwell, Timothy S. Randell, Scott Shaykhiev, Renat J Clin Transl Sci Translational Science, Policy, & Health Outcomes Science OBJECTIVES/SPECIFIC AIMS: The objective of this study was to reconstruct patient-specific distal airway patterns at the tissue- and single-cell resolution and develop personalized distal airway models based on utilization of patient-derived DABCs and autologous region-specific stromal cells. METHODS/STUDY POPULATION: Patient-specific distal airway units, containing parental small bronchiole (<2 mm in diameter, >12(th) generation) and daughter airway branches, including pre-terminal/terminal bronchioles, leading to alveoli (3-7 units/lung), were dissected. Epithelial and stromal cells were isolated from these units and processed for ddSeq single-cell RNA-sequencing (n=6 samples). Autologous DABCs and stromal cells were isolated, propagated, biobanked, and used for establishment of patient-specific distal airway models (3D-organoids and air-liquid interface-based airway wall model; n=10 samples). Region-specific tissue patterns were evaluated using immunofluorescence and laser-capture microdissection (LCM; n=6 samples). RESULTS/ANTICIPATED RESULTS: Single-cell-based human distal airway transcriptome map (constructed based on the analysis of >6,500 distal airway cells obtained from 6 subjects) identified physiological and COPD-relevant distal airway differentiation patterns, including distal airway-specific secretory phenotype (DASP) characterized with high expression of secretoglobins 3A2 and 3A1, surfactant proteins SFTPB and SFTPA2, and mucin 1, unique signatures of DABCs, and stromal (fibroblasts, smooth muscle, endothelial cell subpopulations) and immune (macrophage, T cells, B cell, mast cells). Immunofluorescence analysis and LCM confirmed distribution of cell type-specific markers with differential expression patterns of DABC and DASP signatures. Patient-derived DABC-stromal co-culture models reproduced 3 regenerative patterns: 1) physiological (high DABC-clonogenic potency, establishment of polarized differentiated organoids and DASP-expressing epithelia); 2) hypo-regenerative (failure of DABCs to form clones, spheres and mechanically stable differentiated epithelial barrier); and 3) hyperplastic (generation of DABC hyperplasia accompanied in some COPD samples by mucous-cell hyperplasia mimicking in vivo remodeling patterns). DISCUSSION/SIGNIFICANCE OF IMPACT: Patient-specific maps and models of distal airway regeneration patterns have been established in this study, which can be used to identify candidate pathways that mediate disease-relevant airway remodeling and potentially utilized as pre-clinical platforms for developing personalized therapeutic approaches to suppress the progression of distal airway remodeling in chronic lung diseases, including COPD. Cambridge University Press 2019-03-27 /pmc/articles/PMC6798976/ http://dx.doi.org/10.1017/cts.2019.352 Text en © The Association for Clinical and Translational Science 2019 http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives licence (http://creativecommons.org/licenses/by-ncnd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is unaltered and is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use or in order to create a derivative work.
spellingShingle Translational Science, Policy, & Health Outcomes Science
Mahjour, Seyed Babak
Gomi, Kazunori
Rustam, Samir
Dolma, Phurbu
Krishnan, Jamuna
Elemento, Olivier
D’Ovidio, Frank
Blackwell, Timothy S.
Randell, Scott
Shaykhiev, Renat
3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title_full 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title_fullStr 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title_full_unstemmed 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title_short 3055 Reconstruction of Patient-specific Distal Airway Regeneration Patterns in COPD
title_sort 3055 reconstruction of patient-specific distal airway regeneration patterns in copd
topic Translational Science, Policy, & Health Outcomes Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6798976/
http://dx.doi.org/10.1017/cts.2019.352
work_keys_str_mv AT mahjourseyedbabak 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT gomikazunori 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT rustamsamir 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT dolmaphurbu 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT krishnanjamuna 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT elementoolivier 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT dovidiofrank 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT blackwelltimothys 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT randellscott 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd
AT shaykhievrenat 3055reconstructionofpatientspecificdistalairwayregenerationpatternsincopd