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Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay

Mutations in the BRCA1 gene are known to be a major cause of hereditary breast cancer. However, characterizing the point mutations associated with cancer in BRCA1 is challenging because the functional impact of most of them is still unknown. Nowadays, a variety of methods are employed to identify ca...

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Autores principales: Yadegari, Fatemeh, Farahmand, Leila, Esmaeili, Rezvan, Samadi, Tannaz, Majidzadeh, Keivan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shiraz University 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6802689/
https://www.ncbi.nlm.nih.gov/pubmed/31998812
http://dx.doi.org/10.22099/mbrc.2019.33971.1414
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author Yadegari, Fatemeh
Farahmand, Leila
Esmaeili, Rezvan
Samadi, Tannaz
Majidzadeh, Keivan
author_facet Yadegari, Fatemeh
Farahmand, Leila
Esmaeili, Rezvan
Samadi, Tannaz
Majidzadeh, Keivan
author_sort Yadegari, Fatemeh
collection PubMed
description Mutations in the BRCA1 gene are known to be a major cause of hereditary breast cancer. However, characterizing the point mutations associated with cancer in BRCA1 is challenging because the functional impact of most of them is still unknown. Nowadays, a variety of methods are employed to identify cancer-associated mutations in BRCA1. This study is aimed to assess the functional effects of two mutations, Asp1733Gly and Val1714Gly, using a combination of in silico tools and yeast functional transcription activator assay. Our computational analysis showed that theVal1714Gly mutation was deleterious, while the other one, Asp1733Gly, predicted as neutral. Also using yeast functional transcription activator assay, we found that the Asp1733Gly mutation displayed similar ability with positive controls. In contrast, the Val1714Gly mutation completely abrogated transcriptional activity in the yeast. These results suggested that Val1714Gly and Asp1733Gly can be classified as pathogenic and benign mutations for the BRCA1, respectively.
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spelling pubmed-68026892020-01-29 Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay Yadegari, Fatemeh Farahmand, Leila Esmaeili, Rezvan Samadi, Tannaz Majidzadeh, Keivan Mol Biol Res Commun Original Article Mutations in the BRCA1 gene are known to be a major cause of hereditary breast cancer. However, characterizing the point mutations associated with cancer in BRCA1 is challenging because the functional impact of most of them is still unknown. Nowadays, a variety of methods are employed to identify cancer-associated mutations in BRCA1. This study is aimed to assess the functional effects of two mutations, Asp1733Gly and Val1714Gly, using a combination of in silico tools and yeast functional transcription activator assay. Our computational analysis showed that theVal1714Gly mutation was deleterious, while the other one, Asp1733Gly, predicted as neutral. Also using yeast functional transcription activator assay, we found that the Asp1733Gly mutation displayed similar ability with positive controls. In contrast, the Val1714Gly mutation completely abrogated transcriptional activity in the yeast. These results suggested that Val1714Gly and Asp1733Gly can be classified as pathogenic and benign mutations for the BRCA1, respectively. Shiraz University 2019-09 /pmc/articles/PMC6802689/ /pubmed/31998812 http://dx.doi.org/10.22099/mbrc.2019.33971.1414 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Yadegari, Fatemeh
Farahmand, Leila
Esmaeili, Rezvan
Samadi, Tannaz
Majidzadeh, Keivan
Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title_full Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title_fullStr Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title_full_unstemmed Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title_short Functional investigation of the BRCA1 Val1714Gly and Asp1733Gly variants by computational tools and yeast transcription activation assay
title_sort functional investigation of the brca1 val1714gly and asp1733gly variants by computational tools and yeast transcription activation assay
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6802689/
https://www.ncbi.nlm.nih.gov/pubmed/31998812
http://dx.doi.org/10.22099/mbrc.2019.33971.1414
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