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Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer

Since filamentous fungi rapidly adjust their metabolic properties to environmental changes, a rigorous standardization and characterization of cultivation conditions is necessary to obtain meaningful and reproducible results. In batch cultures, which are commonly characterized according to the class...

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Autores principales: Vrabl, Pamela, Schinagl, Christoph W., Artmann, Desirée J., Heiss, Benedikt, Burgstaller, Wolfgang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805767/
https://www.ncbi.nlm.nih.gov/pubmed/31681243
http://dx.doi.org/10.3389/fmicb.2019.02391
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author Vrabl, Pamela
Schinagl, Christoph W.
Artmann, Desirée J.
Heiss, Benedikt
Burgstaller, Wolfgang
author_facet Vrabl, Pamela
Schinagl, Christoph W.
Artmann, Desirée J.
Heiss, Benedikt
Burgstaller, Wolfgang
author_sort Vrabl, Pamela
collection PubMed
description Since filamentous fungi rapidly adjust their metabolic properties to environmental changes, a rigorous standardization and characterization of cultivation conditions is necessary to obtain meaningful and reproducible results. In batch cultures, which are commonly characterized according to the classical growth curve in textbooks (i.e., lag, exponential, stationary, and declining phase), this is of special difficulty. Although various studies in literature report atypically shaped growth curves of filamentous fungi in batch culture, systematic investigations on this topic are scarce and deviations are barely mentioned in textbooks. Summarizing approximately a decade of observations of growth characteristics from bioreactor batch grown filamentous fungi – in particular two strains (CBS123.823 and CBS123.824) of Penicillium ochrochloron – we demonstrate with a series of highly standardized bioreactor batch culture experiments that the classical growth curve failed to describe growth dynamics of the studied fungi in this work. The nature of the first exhausted nutrient was of remarkable importance for the resulting shape of the growth curve. In all experiments, online respirometry proved to be a powerful tool to distinguish growth phases and revealed more physiological states than expected from the mere biomass curve. In this respect we discuss why “atypical” shaped growth curves often remain unrecognized and that they might be the rule rather than the exception. Acknowledging the importance of the correct presentation of this complex topic in textbooks, we also propose a modified growth curve scheme to sensitize students for potential alternative shaped growth curves.
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spelling pubmed-68057672019-11-01 Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer Vrabl, Pamela Schinagl, Christoph W. Artmann, Desirée J. Heiss, Benedikt Burgstaller, Wolfgang Front Microbiol Microbiology Since filamentous fungi rapidly adjust their metabolic properties to environmental changes, a rigorous standardization and characterization of cultivation conditions is necessary to obtain meaningful and reproducible results. In batch cultures, which are commonly characterized according to the classical growth curve in textbooks (i.e., lag, exponential, stationary, and declining phase), this is of special difficulty. Although various studies in literature report atypically shaped growth curves of filamentous fungi in batch culture, systematic investigations on this topic are scarce and deviations are barely mentioned in textbooks. Summarizing approximately a decade of observations of growth characteristics from bioreactor batch grown filamentous fungi – in particular two strains (CBS123.823 and CBS123.824) of Penicillium ochrochloron – we demonstrate with a series of highly standardized bioreactor batch culture experiments that the classical growth curve failed to describe growth dynamics of the studied fungi in this work. The nature of the first exhausted nutrient was of remarkable importance for the resulting shape of the growth curve. In all experiments, online respirometry proved to be a powerful tool to distinguish growth phases and revealed more physiological states than expected from the mere biomass curve. In this respect we discuss why “atypical” shaped growth curves often remain unrecognized and that they might be the rule rather than the exception. Acknowledging the importance of the correct presentation of this complex topic in textbooks, we also propose a modified growth curve scheme to sensitize students for potential alternative shaped growth curves. Frontiers Media S.A. 2019-10-16 /pmc/articles/PMC6805767/ /pubmed/31681243 http://dx.doi.org/10.3389/fmicb.2019.02391 Text en Copyright © 2019 Vrabl, Schinagl, Artmann, Heiss and Burgstaller. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Vrabl, Pamela
Schinagl, Christoph W.
Artmann, Desirée J.
Heiss, Benedikt
Burgstaller, Wolfgang
Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title_full Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title_fullStr Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title_full_unstemmed Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title_short Fungal Growth in Batch Culture – What We Could Benefit If We Start Looking Closer
title_sort fungal growth in batch culture – what we could benefit if we start looking closer
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805767/
https://www.ncbi.nlm.nih.gov/pubmed/31681243
http://dx.doi.org/10.3389/fmicb.2019.02391
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