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Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa
Tree peony (Paeonia suffruticosa Andrew) is a popular ornamental plant due to its large, fragrant and colorful flowers. The floral development is the most important event in its lifecycle. To explore the mechanism that regulate flower development, we sequenced the flower bud transcriptomes of ‘High...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805890/ https://www.ncbi.nlm.nih.gov/pubmed/31641161 http://dx.doi.org/10.1038/s41597-019-0240-1 |
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author | Chang, Yanting Hu, Tao Zhang, Wenbo Zhou, Lin Wang, Yan Jiang, Zehui |
author_facet | Chang, Yanting Hu, Tao Zhang, Wenbo Zhou, Lin Wang, Yan Jiang, Zehui |
author_sort | Chang, Yanting |
collection | PubMed |
description | Tree peony (Paeonia suffruticosa Andrew) is a popular ornamental plant due to its large, fragrant and colorful flowers. The floral development is the most important event in its lifecycle. To explore the mechanism that regulate flower development, we sequenced the flower bud transcriptomes of ‘High Noon’, a reblooming cultivar of P. suffruticosa × P. lutea, using both full-length isoform-sequencing (ISO-seq) and RNA-seq were sequenced. A total of 15.94 Gb raw data were generated in full-length transcriptome sequencing of the 3 floral developmental stages, resulting 0.11 M protein-coding transcripts. Over 457.0 million reads were obtained by RNA-seq in the 3 floral buds. Here, we openly released the full-length transcriptome database of ‘High Noon’ and RNA-seq database of floral development. These databases can provide a fundamental genetic information of tree peony to investigate its transcript structure, variants and evolution. Data will facilitate to deep analyses of the transcriptome for flower development. |
format | Online Article Text |
id | pubmed-6805890 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68058902019-10-30 Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa Chang, Yanting Hu, Tao Zhang, Wenbo Zhou, Lin Wang, Yan Jiang, Zehui Sci Data Data Descriptor Tree peony (Paeonia suffruticosa Andrew) is a popular ornamental plant due to its large, fragrant and colorful flowers. The floral development is the most important event in its lifecycle. To explore the mechanism that regulate flower development, we sequenced the flower bud transcriptomes of ‘High Noon’, a reblooming cultivar of P. suffruticosa × P. lutea, using both full-length isoform-sequencing (ISO-seq) and RNA-seq were sequenced. A total of 15.94 Gb raw data were generated in full-length transcriptome sequencing of the 3 floral developmental stages, resulting 0.11 M protein-coding transcripts. Over 457.0 million reads were obtained by RNA-seq in the 3 floral buds. Here, we openly released the full-length transcriptome database of ‘High Noon’ and RNA-seq database of floral development. These databases can provide a fundamental genetic information of tree peony to investigate its transcript structure, variants and evolution. Data will facilitate to deep analyses of the transcriptome for flower development. Nature Publishing Group UK 2019-10-22 /pmc/articles/PMC6805890/ /pubmed/31641161 http://dx.doi.org/10.1038/s41597-019-0240-1 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Chang, Yanting Hu, Tao Zhang, Wenbo Zhou, Lin Wang, Yan Jiang, Zehui Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title | Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title_full | Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title_fullStr | Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title_full_unstemmed | Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title_short | Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa |
title_sort | transcriptome profiling for floral development in reblooming cultivar ‘high noon’ of paeonia suffruticosa |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805890/ https://www.ncbi.nlm.nih.gov/pubmed/31641161 http://dx.doi.org/10.1038/s41597-019-0240-1 |
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