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Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure

Exposure to ionizing radiation associated with highly energetic and charged heavy particles is an inherent risk astronauts face in long duration space missions. We have previously considered the transcriptional effects that three levels of radiation (0.3 Gy, 1.5 Gy, and 3.0 Gy) have at an immediate...

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Autores principales: Rouchka, Eric C., Flight, Robert M., Fasciotto, Bridgitte H., Estrada, Rosendo, Eaton, John W., Patibandla, Phani K., Waigel, Sabine J., Li, Dazhuo, Kirtley, John K., Sethu, Palaniappan, Keynton, Robert S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6806397/
https://www.ncbi.nlm.nih.gov/pubmed/31692674
http://dx.doi.org/10.1016/j.dib.2019.104624
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author Rouchka, Eric C.
Flight, Robert M.
Fasciotto, Bridgitte H.
Estrada, Rosendo
Eaton, John W.
Patibandla, Phani K.
Waigel, Sabine J.
Li, Dazhuo
Kirtley, John K.
Sethu, Palaniappan
Keynton, Robert S.
author_facet Rouchka, Eric C.
Flight, Robert M.
Fasciotto, Bridgitte H.
Estrada, Rosendo
Eaton, John W.
Patibandla, Phani K.
Waigel, Sabine J.
Li, Dazhuo
Kirtley, John K.
Sethu, Palaniappan
Keynton, Robert S.
author_sort Rouchka, Eric C.
collection PubMed
description Exposure to ionizing radiation associated with highly energetic and charged heavy particles is an inherent risk astronauts face in long duration space missions. We have previously considered the transcriptional effects that three levels of radiation (0.3 Gy, 1.5 Gy, and 3.0 Gy) have at an immediate time point (1 hr) post-exposure [1]. Our analysis of these results suggest effects on transcript levels that could be modulated at lower radiation doses [2]. In addition, a time dependent effect is likely to be present. Therefore, in order to develop a lab-on-a-chip approach for detection of radiation exposure in terms of both radiation level and time since exposure, we developed a time- and dose-course study to determine appropriate sensitive and specific transcript biomarkers that are detectable in blood samples. The data described herein was developed from a study measuring exposure to 0.15 Gy, 0.30 Gy, and 1.5 Gy of radiation at 1 hr, 2 hr, and 6 hr post-exposure using Affymetrix® GeneChip® PrimeView™ microarrays. This report includes raw gene expression data files from the resulting microarray experiments representing typical radiation exposure levels an astronaut may experience as part of a long duration space mission. The data described here is available in NCBI's Gene Expression Omnibus (GEO), accession GSE63952.
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spelling pubmed-68063972019-11-05 Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure Rouchka, Eric C. Flight, Robert M. Fasciotto, Bridgitte H. Estrada, Rosendo Eaton, John W. Patibandla, Phani K. Waigel, Sabine J. Li, Dazhuo Kirtley, John K. Sethu, Palaniappan Keynton, Robert S. Data Brief Biochemistry, Genetics and Molecular Biology Exposure to ionizing radiation associated with highly energetic and charged heavy particles is an inherent risk astronauts face in long duration space missions. We have previously considered the transcriptional effects that three levels of radiation (0.3 Gy, 1.5 Gy, and 3.0 Gy) have at an immediate time point (1 hr) post-exposure [1]. Our analysis of these results suggest effects on transcript levels that could be modulated at lower radiation doses [2]. In addition, a time dependent effect is likely to be present. Therefore, in order to develop a lab-on-a-chip approach for detection of radiation exposure in terms of both radiation level and time since exposure, we developed a time- and dose-course study to determine appropriate sensitive and specific transcript biomarkers that are detectable in blood samples. The data described herein was developed from a study measuring exposure to 0.15 Gy, 0.30 Gy, and 1.5 Gy of radiation at 1 hr, 2 hr, and 6 hr post-exposure using Affymetrix® GeneChip® PrimeView™ microarrays. This report includes raw gene expression data files from the resulting microarray experiments representing typical radiation exposure levels an astronaut may experience as part of a long duration space mission. The data described here is available in NCBI's Gene Expression Omnibus (GEO), accession GSE63952. Elsevier 2019-10-05 /pmc/articles/PMC6806397/ /pubmed/31692674 http://dx.doi.org/10.1016/j.dib.2019.104624 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Rouchka, Eric C.
Flight, Robert M.
Fasciotto, Bridgitte H.
Estrada, Rosendo
Eaton, John W.
Patibandla, Phani K.
Waigel, Sabine J.
Li, Dazhuo
Kirtley, John K.
Sethu, Palaniappan
Keynton, Robert S.
Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title_full Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title_fullStr Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title_full_unstemmed Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title_short Dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
title_sort dataset for dose and time-dependent transcriptional response to ionizing radiation exposure
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6806397/
https://www.ncbi.nlm.nih.gov/pubmed/31692674
http://dx.doi.org/10.1016/j.dib.2019.104624
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